Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 KRT16P5-201ENST00000455284 522 ntBASIC15.81■□□□□ 0.12
LINC01006Q8NI28 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 HTR7P1-201ENST00000538670 1336 ntBASIC15.81■□□□□ 0.12
LINC01006Q8NI28 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 AF186192.3-201ENST00000583427 947 ntBASIC15.81■□□□□ 0.12
LINC01006Q8NI28 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 AC026471.5-201ENST00000615068 467 ntBASIC15.81■□□□□ 0.12
LINC01006Q8NI28 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 AC124283.5-201ENST00000624661 1809 ntBASIC15.81■□□□□ 0.12
LINC01006Q8NI28 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01006Q8NI28 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 NBPF21P-201ENST00000425093 1451 ntBASIC15.8■□□□□ 0.12
LINC01006Q8NI28 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC01006Q8NI28 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 AL353807.1-201ENST00000427475 662 ntBASIC15.79■□□□□ 0.12
LINC01006Q8NI28 AL355355.2-201ENST00000442321 338 ntBASIC15.79■□□□□ 0.12
LINC01006Q8NI28 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 AP003071.4-201ENST00000562276 1284 ntBASIC15.79■□□□□ 0.12
LINC01006Q8NI28 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 AC097493.4-201ENST00000641197 219 ntBASIC15.79■□□□□ 0.12
LINC01006Q8NI28 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01006Q8NI28 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 CD177P1-201ENST00000606252 935 ntBASIC15.78■□□□□ 0.12
LINC01006Q8NI28 AC012306.2-201ENST00000609350 630 ntBASIC15.78■□□□□ 0.12
LINC01006Q8NI28 AL121906.2-201ENST00000621597 723 ntBASIC15.78■□□□□ 0.12
LINC01006Q8NI28 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01006Q8NI28 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 Z98882.1-201ENST00000622160 2253 ntBASIC15.77■□□□□ 0.12
LINC01006Q8NI28 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms