Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C11orf42Q8N5U0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 MIPEPP3-201ENST00000412105 444 ntBASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf42Q8N5U0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 AC087633.2-202ENST00000565166 1439 ntBASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf42Q8N5U0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 KRT17P1-201ENST00000399211 1546 ntBASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 AC007225.1-201ENST00000566331 1836 ntBASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 KRT18P68-201ENST00000392293 1000 ntBASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 AC142086.2-201ENST00000569753 217 ntBASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf42Q8N5U0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.75■□□□□ 0.27
C11orf42Q8N5U0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms