Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.51■■□□□ 1.03
TTC39CQ8N584 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 DPP3P2-201ENST00000416030 1696 ntBASIC21.5■■□□□ 1.03
TTC39CQ8N584 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 HLA-G-202ENST00000376815 851 ntBASIC21.5■■□□□ 1.03
TTC39CQ8N584 HLA-G-203ENST00000376818 1127 ntBASIC21.5■■□□□ 1.03
TTC39CQ8N584 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.5■■□□□ 1.03
TTC39CQ8N584 HLA-B-256ENST00000639848 1089 ntBASIC21.5■■□□□ 1.03
TTC39CQ8N584 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TTC39CQ8N584 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39CQ8N584 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TTC39CQ8N584 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.49■■□□□ 1.03
TTC39CQ8N584 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TTC39CQ8N584 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TTC39CQ8N584 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC39CQ8N584 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.49■■□□□ 1.03
TTC39CQ8N584 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
TTC39CQ8N584 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39CQ8N584 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TTC39CQ8N584 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TTC39CQ8N584 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.48■■□□□ 1.03
TTC39CQ8N584 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC39CQ8N584 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.48■■□□□ 1.03
TTC39CQ8N584 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39CQ8N584 PTBP1P-201ENST00000554374 1601 ntBASIC21.47■■□□□ 1.03
TTC39CQ8N584 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 KRT8P20-201ENST00000423953 1409 ntBASIC21.47■■□□□ 1.03
TTC39CQ8N584 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 AC098934.4-201ENST00000564127 592 ntBASIC21.47■■□□□ 1.03
TTC39CQ8N584 AL031963.3-201ENST00000606441 850 ntBASIC21.47■■□□□ 1.03
TTC39CQ8N584 AC083880.1-201ENST00000608266 535 ntBASIC21.47■■□□□ 1.03
TTC39CQ8N584 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39CQ8N584 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39CQ8N584 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39CQ8N584 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39CQ8N584 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.46■■□□□ 1.03
TTC39CQ8N584 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39CQ8N584 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39CQ8N584 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.46■■□□□ 1.03
TTC39CQ8N584 AC060766.5-201ENST00000590539 871 ntBASIC21.46■■□□□ 1.03
TTC39CQ8N584 LINC01521-201ENST00000504184 1943 ntBASIC21.46■■□□□ 1.03
TTC39CQ8N584 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TTC39CQ8N584 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.46■■□□□ 1.03
TTC39CQ8N584 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39CQ8N584 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39CQ8N584 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC39CQ8N584 KRT8P17-201ENST00000453110 1448 ntBASIC21.46■■□□□ 1.03
TTC39CQ8N584 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TTC39CQ8N584 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms