Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHPFQ8IZ52 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 PKD1P6-201ENST00000343738 4769 ntBASIC20.6■□□□□ 0.89
CHPFQ8IZ52 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 Z99916.2-201ENST00000604037 246 ntBASIC20.6■□□□□ 0.89
CHPFQ8IZ52 MTDHP1-201ENST00000605323 784 ntBASIC20.6■□□□□ 0.89
CHPFQ8IZ52 AL023875.1-201ENST00000640777 796 ntBASIC20.6■□□□□ 0.89
CHPFQ8IZ52 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 Z98882.1-201ENST00000622160 2253 ntBASIC20.6■□□□□ 0.89
CHPFQ8IZ52 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHPFQ8IZ52 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 AC239809.2-201ENST00000415381 517 ntBASIC20.59■□□□□ 0.89
CHPFQ8IZ52 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 MIR4497-201ENST00000583208 89 ntBASIC20.59■□□□□ 0.89
CHPFQ8IZ52 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHPFQ8IZ52 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.58■□□□□ 0.89
CHPFQ8IZ52 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHPFQ8IZ52 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHPFQ8IZ52 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms