Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC60Q8IWA6 AC007225.1-201ENST00000566331 1836 ntBASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 PTBP1P-201ENST00000554374 1601 ntBASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 AL390719.1-204ENST00000412397 1219 ntBASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 AC093827.2-201ENST00000512654 315 ntBASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 AC023632.3-201ENST00000521633 145 ntBASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 RN7SL471P-201ENST00000580476 299 ntBASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC60Q8IWA6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 C1QBPP2-201ENST00000528754 825 ntBASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC60Q8IWA6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 RPPH1-201ENST00000516869 333 ntBASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC60Q8IWA6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC60Q8IWA6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
CCDC60Q8IWA6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.51■■□□□ 1.19
CCDC60Q8IWA6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC60Q8IWA6 AL137060.1-201ENST00000618151 2648 ntBASIC22.51■■□□□ 1.19
CCDC60Q8IWA6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC60Q8IWA6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CCDC60Q8IWA6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 MTDHP1-201ENST00000605323 784 ntBASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CCDC60Q8IWA6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms