Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 AC007952.6-201ENST00000573168 2673 ntBASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 AC003957.1-201ENST00000625108 2673 ntBASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 FAM21FP-204ENST00000608637 956 ntBASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE8Q86YQ8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 AL158211.5-201ENST00000623583 2518 ntBASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 AC006015.1-201ENST00000429970 570 ntBASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 AC068338.2-201ENST00000563278 1430 ntBASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 AC087633.2-202ENST00000565166 1439 ntBASIC21.19■□□□□ 0.98
CPNE8Q86YQ8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 AL356652.1-201ENST00000615962 565 ntBASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE8Q86YQ8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 AC007322.4-201ENST00000509611 723 ntBASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 AC013268.1-206ENST00000638368 961 ntBASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 AC112229.1-201ENST00000639295 961 ntBASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE8Q86YQ8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms