Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 DUX4L16-201ENST00000555130 1264 ntBASIC18.61■□□□□ 0.57
ZNF550Q7Z398 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF550Q7Z398 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 NCF1B-203ENST00000435988 1254 ntBASIC18.6■□□□□ 0.57
ZNF550Q7Z398 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF550Q7Z398 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 AC087633.2-202ENST00000565166 1439 ntBASIC18.59■□□□□ 0.57
ZNF550Q7Z398 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 AC007322.1-201ENST00000426983 750 ntBASIC18.59■□□□□ 0.57
ZNF550Q7Z398 AL356652.1-201ENST00000615962 565 ntBASIC18.59■□□□□ 0.57
ZNF550Q7Z398 AL050303.2-201ENST00000619798 666 ntBASIC18.59■□□□□ 0.57
ZNF550Q7Z398 AC231657.2-201ENST00000624556 255 ntBASIC18.59■□□□□ 0.57
ZNF550Q7Z398 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF550Q7Z398 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ZNF550Q7Z398 CYP21A1P-202ENST00000354927 1481 ntBASIC18.58■□□□□ 0.57
ZNF550Q7Z398 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF550Q7Z398 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.58■□□□□ 0.57
ZNF550Q7Z398 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.58■□□□□ 0.57
ZNF550Q7Z398 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF550Q7Z398 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 GPX1P1-201ENST00000388829 606 ntBASIC18.58■□□□□ 0.56
ZNF550Q7Z398 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 AC005181.1-201ENST00000604782 1256 ntBASIC18.58■□□□□ 0.56
ZNF550Q7Z398 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF550Q7Z398 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF550Q7Z398 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms