Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NHLRC1Q6VVB1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NHLRC1Q6VVB1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.14■□□□□ 0.5
NHLRC1Q6VVB1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
NHLRC1Q6VVB1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NHLRC1Q6VVB1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 AL050303.2-201ENST00000619798 666 ntBASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 OR10C1-204ENST00000622521 1039 ntBASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 AL512408.1-201ENST00000569378 2000 ntBASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.13■□□□□ 0.49
NHLRC1Q6VVB1 AC092720.2-201ENST00000602388 1665 ntBASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 AL512625.2-201ENST00000417533 625 ntBASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.12■□□□□ 0.49
NHLRC1Q6VVB1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 AC133552.2-202ENST00000575694 574 ntBASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 AC005181.1-201ENST00000604782 1256 ntBASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 AL356652.1-201ENST00000615962 565 ntBASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NHLRC1Q6VVB1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms