Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CASC4Q6P4E1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASC4Q6P4E1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CASC4Q6P4E1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASC4Q6P4E1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.58■□□□□ 0.88
CASC4Q6P4E1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 CDV3P1-201ENST00000471403 739 ntBASIC20.57■□□□□ 0.88
CASC4Q6P4E1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASC4Q6P4E1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 NTF6G-201ENST00000591094 616 ntBASIC20.56■□□□□ 0.88
CASC4Q6P4E1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.56■□□□□ 0.88
CASC4Q6P4E1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 FAM21FP-204ENST00000608637 956 ntBASIC20.55■□□□□ 0.88
CASC4Q6P4E1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 MYCNOS-205ENST00000641950 531 ntBASIC20.55■□□□□ 0.88
CASC4Q6P4E1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CASC4Q6P4E1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CASC4Q6P4E1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 AC034268.1-201ENST00000441047 882 ntBASIC20.53■□□□□ 0.88
CASC4Q6P4E1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.53■□□□□ 0.88
CASC4Q6P4E1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASC4Q6P4E1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms