Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
H3F3CQ6NXT2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 AC093827.2-201ENST00000512654 315 ntBASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 AC069544.1-201ENST00000609399 999 ntBASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 AC120498.8-201ENST00000614275 531 ntBASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 AL359736.2-201ENST00000621992 437 ntBASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.7■□□□□ 0.58
H3F3CQ6NXT2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 AL137060.1-201ENST00000618151 2648 ntBASIC18.69■□□□□ 0.58
H3F3CQ6NXT2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 RPPH1-201ENST00000516869 333 ntBASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 AC233263.1-201ENST00000578059 224 ntBASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
H3F3CQ6NXT2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 AL390719.1-204ENST00000412397 1219 ntBASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 UBE2SP1-201ENST00000450587 669 ntBASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 AC023632.3-201ENST00000521633 145 ntBASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms