Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC31.47■■■□□ 2.63
CCDC18Q5T9S5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 AC087499.1-201ENST00000418141 1075 ntBASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 AC012306.2-201ENST00000609350 630 ntBASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
CCDC18Q5T9S5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CCDC18Q5T9S5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CCDC18Q5T9S5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC31.45■■■□□ 2.63
CCDC18Q5T9S5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CCDC18Q5T9S5 NBPF21P-201ENST00000425093 1451 ntBASIC31.45■■■□□ 2.63
CCDC18Q5T9S5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CCDC18Q5T9S5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCDC18Q5T9S5 AF186192.3-201ENST00000583427 947 ntBASIC31.45■■■□□ 2.62
CCDC18Q5T9S5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.45■■■□□ 2.62
CCDC18Q5T9S5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CCDC18Q5T9S5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 AC211429.1-201ENST00000415277 523 ntBASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC18Q5T9S5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC18Q5T9S5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 FAM210CP-201ENST00000445714 574 ntBASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 TSPY15P-201ENST00000457163 923 ntBASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 AL031963.3-201ENST00000606441 850 ntBASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 AC026471.5-201ENST00000615068 467 ntBASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
CCDC18Q5T9S5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 AL353708.3-201ENST00000610272 989 ntBASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC18Q5T9S5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC18Q5T9S5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms