Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 MIR940-201ENST00000401276 94 ntBASIC11.19□□□□□ -0.62
UBR4Q5T4S7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 RNA5SP419-201ENST00000515908 135 ntBASIC11.19□□□□□ -0.62
UBR4Q5T4S7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 AP001160.2-201ENST00000596071 487 ntBASIC11.19□□□□□ -0.62
UBR4Q5T4S7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 H19-210ENST00000439725 1929 ntTSL 2 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBR4Q5T4S7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 AL136038.3-201ENST00000561909 1096 ntBASIC11.18□□□□□ -0.62
UBR4Q5T4S7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 TSPY19P-201ENST00000418461 509 ntBASIC11.18□□□□□ -0.62
UBR4Q5T4S7 TSPY18P-201ENST00000441642 509 ntBASIC11.18□□□□□ -0.62
UBR4Q5T4S7 KRT18P38-201ENST00000449496 1282 ntBASIC11.18□□□□□ -0.62
UBR4Q5T4S7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 AP002982.1-201ENST00000492365 877 ntBASIC11.18□□□□□ -0.62
UBR4Q5T4S7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
UBR4Q5T4S7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 AC079781.3-201ENST00000449110 356 ntBASIC11.17□□□□□ -0.62
UBR4Q5T4S7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 TSPY12P-201ENST00000421279 868 ntBASIC11.17□□□□□ -0.62
UBR4Q5T4S7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 HOMER2P1-201ENST00000455653 964 ntBASIC11.17□□□□□ -0.62
UBR4Q5T4S7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBR4Q5T4S7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 AL662844.1-201ENST00000546340 181 ntBASIC11.16□□□□□ -0.62
UBR4Q5T4S7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC11.16□□□□□ -0.62
UBR4Q5T4S7 AL031985.4-201ENST00000642138 673 ntBASIC11.16□□□□□ -0.62
UBR4Q5T4S7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms