Protein–RNA interactions for Protein: Q05940

SLC18A2, Synaptic vesicular amine transporter, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18A2Q05940 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4L2-201ENST00000561772 1275 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 AC243732.1-201ENST00000612648 864 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4L6-201ENST00000626483 1275 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4L1-201ENST00000627662 1275 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4L8-201ENST00000629013 1275 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4L3-201ENST00000630187 1275 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4L7-201ENST00000630678 1275 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 DUX4L5-201ENST00000630834 1275 ntBASIC20.06■□□□□ 0.8
SLC18A2Q05940 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC18A2Q05940 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC18A2Q05940 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLC18A2Q05940 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC18A2Q05940 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC18A2Q05940 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC18A2Q05940 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 AL139246.5-201ENST00000606645 996 ntBASIC20.05■□□□□ 0.8
SLC18A2Q05940 MIR6084-201ENST00000622012 110 ntBASIC20.05■□□□□ 0.8
SLC18A2Q05940 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC18A2Q05940 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 AC007322.3-201ENST00000426526 701 ntBASIC20.04■□□□□ 0.8
SLC18A2Q05940 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC18A2Q05940 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC18A2Q05940 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.03■□□□□ 0.8
SLC18A2Q05940 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.03■□□□□ 0.8
SLC18A2Q05940 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 SUDS3P1-201ENST00000505831 966 ntBASIC20.03■□□□□ 0.8
SLC18A2Q05940 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 AP001160.3-201ENST00000601484 763 ntBASIC20.03■□□□□ 0.8
SLC18A2Q05940 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC18A2Q05940 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC18A2Q05940 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC18A2Q05940 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLC18A2Q05940 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC18A2Q05940 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC18A2Q05940 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SLC18A2Q05940 KRT18P20-201ENST00000548986 1279 ntBASIC20.02■□□□□ 0.8
SLC18A2Q05940 CCDC92B-201ENST00000575506 885 ntBASIC20.02■□□□□ 0.8
SLC18A2Q05940 AC104187.1-201ENST00000607510 612 ntBASIC20.02■□□□□ 0.8
SLC18A2Q05940 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC18A2Q05940 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms