Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL38P63173 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RPL38P63173 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL38P63173 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RPL38P63173 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL38P63173 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.43■□□□□ 0.7
RPL38P63173 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.43■□□□□ 0.7
RPL38P63173 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.43■□□□□ 0.7
RPL38P63173 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.43■□□□□ 0.7
RPL38P63173 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.43■□□□□ 0.7
RPL38P63173 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.43■□□□□ 0.7
RPL38P63173 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.43■□□□□ 0.7
RPL38P63173 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.43■□□□□ 0.7
RPL38P63173 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.43■□□□□ 0.7
RPL38P63173 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RPL38P63173 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.43■□□□□ 0.7
RPL38P63173 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.43■□□□□ 0.7
RPL38P63173 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.43■□□□□ 0.7
RPL38P63173 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
RPL38P63173 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RPL38P63173 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.43■□□□□ 0.7
RPL38P63173 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.43■□□□□ 0.7
RPL38P63173 AC007952.6-201ENST00000573168 2673 ntBASIC19.43■□□□□ 0.7
RPL38P63173 AC003957.1-201ENST00000625108 2673 ntBASIC19.43■□□□□ 0.7
RPL38P63173 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.43■□□□□ 0.7
RPL38P63173 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPL38P63173 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPL38P63173 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.42■□□□□ 0.7
RPL38P63173 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RPL38P63173 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL38P63173 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.42■□□□□ 0.7
RPL38P63173 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RPL38P63173 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.42■□□□□ 0.7
RPL38P63173 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.42■□□□□ 0.7
RPL38P63173 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.42■□□□□ 0.7
RPL38P63173 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL38P63173 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.41■□□□□ 0.7
RPL38P63173 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.41■□□□□ 0.7
RPL38P63173 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.41■□□□□ 0.7
RPL38P63173 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL38P63173 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPL38P63173 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
RPL38P63173 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPL38P63173 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL38P63173 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RPL38P63173 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RPL38P63173 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RPL38P63173 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.41■□□□□ 0.7
RPL38P63173 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL38P63173 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL38P63173 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL38P63173 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPL38P63173 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL38P63173 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.41■□□□□ 0.7
RPL38P63173 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
RPL38P63173 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RPL38P63173 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.4■□□□□ 0.7
RPL38P63173 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.4■□□□□ 0.7
RPL38P63173 AC097381.1-201ENST00000429019 1296 ntBASIC19.4■□□□□ 0.7
RPL38P63173 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.4■□□□□ 0.7
RPL38P63173 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RPL38P63173 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.4■□□□□ 0.7
RPL38P63173 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.4■□□□□ 0.7
RPL38P63173 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.4■□□□□ 0.7
RPL38P63173 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPL38P63173 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms