Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.61■□□□□ 0.41
SEC61A1P61619 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SEC61A1P61619 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.61■□□□□ 0.41
SEC61A1P61619 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.61■□□□□ 0.41
SEC61A1P61619 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.61■□□□□ 0.41
SEC61A1P61619 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.61■□□□□ 0.41
SEC61A1P61619 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.61■□□□□ 0.41
SEC61A1P61619 AC053503.5-201ENST00000601508 636 ntBASIC17.61■□□□□ 0.41
SEC61A1P61619 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.61■□□□□ 0.41
SEC61A1P61619 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
SEC61A1P61619 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SEC61A1P61619 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.61■□□□□ 0.41
SEC61A1P61619 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SEC61A1P61619 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.6■□□□□ 0.41
SEC61A1P61619 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.6■□□□□ 0.41
SEC61A1P61619 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.6■□□□□ 0.41
SEC61A1P61619 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.6■□□□□ 0.41
SEC61A1P61619 MYCNOS-205ENST00000641950 531 ntBASIC17.6■□□□□ 0.41
SEC61A1P61619 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.6■□□□□ 0.41
SEC61A1P61619 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SEC61A1P61619 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC61A1P61619 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SEC61A1P61619 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC61A1P61619 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC61A1P61619 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.59■□□□□ 0.41
SEC61A1P61619 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SEC61A1P61619 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.59■□□□□ 0.41
SEC61A1P61619 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SEC61A1P61619 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.59■□□□□ 0.41
SEC61A1P61619 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SEC61A1P61619 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC61A1P61619 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC61A1P61619 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC61A1P61619 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SEC61A1P61619 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEC61A1P61619 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
SEC61A1P61619 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
SEC61A1P61619 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.58■□□□□ 0.41
SEC61A1P61619 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC61A1P61619 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC61A1P61619 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.58■□□□□ 0.4
SEC61A1P61619 AC026185.1-201ENST00000445748 174 ntBASIC17.58■□□□□ 0.4
SEC61A1P61619 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.58■□□□□ 0.4
SEC61A1P61619 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.58■□□□□ 0.4
SEC61A1P61619 SLC7A5P2-201ENST00000553010 536 ntBASIC17.58■□□□□ 0.4
SEC61A1P61619 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SEC61A1P61619 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC61A1P61619 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC61A1P61619 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC61A1P61619 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC61A1P61619 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC61A1P61619 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms