Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 AC091305.1-201ENST00000479476 895 ntBASIC16.39■□□□□ 0.21
SPCS3P61009 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.39■□□□□ 0.21
SPCS3P61009 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SPCS3P61009 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.39■□□□□ 0.21
SPCS3P61009 TPRG1LP1-201ENST00000598702 760 ntBASIC16.39■□□□□ 0.21
SPCS3P61009 RARRES2P11-201ENST00000635158 484 ntBASIC16.39■□□□□ 0.21
SPCS3P61009 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.39■□□□□ 0.21
SPCS3P61009 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.39■□□□□ 0.21
SPCS3P61009 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPCS3P61009 TCF3P1-201ENST00000423021 1937 ntBASIC16.39■□□□□ 0.21
SPCS3P61009 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SPCS3P61009 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 KRT87P-202ENST00000534226 1464 ntBASIC16.38■□□□□ 0.21
SPCS3P61009 MIR939-201ENST00000401314 82 ntBASIC16.38■□□□□ 0.21
SPCS3P61009 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.38■□□□□ 0.21
SPCS3P61009 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SPCS3P61009 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.38■□□□□ 0.21
SPCS3P61009 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPCS3P61009 AC008406.3-201ENST00000620001 1374 ntBASIC16.38■□□□□ 0.21
SPCS3P61009 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.38■□□□□ 0.21
SPCS3P61009 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SPCS3P61009 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPCS3P61009 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SPCS3P61009 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.37■□□□□ 0.21
SPCS3P61009 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.37■□□□□ 0.21
SPCS3P61009 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.37■□□□□ 0.21
SPCS3P61009 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.37■□□□□ 0.21
SPCS3P61009 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SPCS3P61009 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.37■□□□□ 0.21
SPCS3P61009 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.37■□□□□ 0.21
SPCS3P61009 AC079140.4-201ENST00000507448 529 ntBASIC16.37■□□□□ 0.21
SPCS3P61009 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.37■□□□□ 0.21
SPCS3P61009 AC131212.1-201ENST00000613771 668 ntBASIC16.37■□□□□ 0.21
SPCS3P61009 MIR2861-201ENST00000636310 90 ntBASIC16.37■□□□□ 0.21
SPCS3P61009 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
SPCS3P61009 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.37■□□□□ 0.21
SPCS3P61009 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SPCS3P61009 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPCS3P61009 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SPCS3P61009 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.36■□□□□ 0.21
SPCS3P61009 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.36■□□□□ 0.21
SPCS3P61009 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.36■□□□□ 0.21
SPCS3P61009 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SPCS3P61009 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.36■□□□□ 0.21
SPCS3P61009 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SPCS3P61009 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.36■□□□□ 0.21
SPCS3P61009 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.36■□□□□ 0.21
SPCS3P61009 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.36■□□□□ 0.21
SPCS3P61009 AF213884.3-201ENST00000563833 479 ntBASIC16.36■□□□□ 0.21
SPCS3P61009 AC138907.5-202ENST00000569484 235 ntBASIC16.36■□□□□ 0.21
SPCS3P61009 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.36■□□□□ 0.21
SPCS3P61009 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SPCS3P61009 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.36■□□□□ 0.21
SPCS3P61009 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPCS3P61009 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.36■□□□□ 0.21
SPCS3P61009 AC116050.2-201ENST00000612102 1779 ntBASIC16.36■□□□□ 0.21
SPCS3P61009 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.35■□□□□ 0.21
SPCS3P61009 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SPCS3P61009 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPCS3P61009 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms