Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH13P55290 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH13P55290 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH13P55290 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 CDV3P1-201ENST00000471403 739 ntBASIC19.74■□□□□ 0.75
CDH13P55290 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH13P55290 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH13P55290 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CDH13P55290 MYCNOS-205ENST00000641950 531 ntBASIC19.74■□□□□ 0.75
CDH13P55290 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH13P55290 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH13P55290 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH13P55290 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CDH13P55290 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH13P55290 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH13P55290 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.73■□□□□ 0.75
CDH13P55290 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.73■□□□□ 0.75
CDH13P55290 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH13P55290 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDH13P55290 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDH13P55290 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH13P55290 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDH13P55290 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH13P55290 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
CDH13P55290 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDH13P55290 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 NTF6G-201ENST00000591094 616 ntBASIC19.72■□□□□ 0.75
CDH13P55290 FAM21FP-204ENST00000608637 956 ntBASIC19.72■□□□□ 0.75
CDH13P55290 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDH13P55290 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDH13P55290 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.72■□□□□ 0.75
CDH13P55290 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH13P55290 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.72■□□□□ 0.75
CDH13P55290 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH13P55290 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH13P55290 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH13P55290 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDH13P55290 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CDH13P55290 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH13P55290 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH13P55290 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CDH13P55290 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.71■□□□□ 0.75
CDH13P55290 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.71■□□□□ 0.75
CDH13P55290 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.71■□□□□ 0.75
CDH13P55290 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH13P55290 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
CDH13P55290 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms