Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 ALA1YOR335C 2877 nt3.08□□□□□ -1.92
CUZ1P53899 YDL242WYDL242W 354 nt3.08□□□□□ -1.92
CUZ1P53899 FMP16YDR070C 282 nt3.08□□□□□ -1.92
CUZ1P53899 UBP11YKR098C 2154 nt3.08□□□□□ -1.92
CUZ1P53899 YGL140CYGL140C 3660 nt3.07□□□□□ -1.92
CUZ1P53899 NUP159YIL115C 4383 nt3.07□□□□□ -1.92
CUZ1P53899 YNL114CYNL114C 372 nt3.07□□□□□ -1.92
CUZ1P53899 YPR108W-AYPR108W-A 213 nt3.07□□□□□ -1.92
CUZ1P53899 RCY1YJL204C 2523 nt3.06□□□□□ -1.92
CUZ1P53899 ANB1YJR047C 474 nt3.06□□□□□ -1.92
CUZ1P53899 MNE1YOR350C 1992 nt3.05□□□□□ -1.92
CUZ1P53899 CHO2YGR157W 2610 nt3.05□□□□□ -1.92
CUZ1P53899 tV(CAC)DtV(CAC)D 73 nt3.05□□□□□ -1.92
CUZ1P53899 tV(CAC)HtV(CAC)H 73 nt3.05□□□□□ -1.92
CUZ1P53899 YMR122W-AYMR122W-A 255 nt3.05□□□□□ -1.92
CUZ1P53899 RSF2YJR127C 4143 nt3.04□□□□□ -1.92
CUZ1P53899 SMY2YBR172C 2223 nt3.04□□□□□ -1.92
CUZ1P53899 RPA135YPR010C 3612 nt3.04□□□□□ -1.92
CUZ1P53899 EDS1YBR033W 2760 nt3.04□□□□□ -1.92
CUZ1P53899 YIL134C-AYIL134C-A 204 nt3.04□□□□□ -1.92
CUZ1P53899 YFR016CYFR016C 3702 nt3.04□□□□□ -1.92
CUZ1P53899 SIZ1YDR409W 2715 nt3.04□□□□□ -1.92
CUZ1P53899 DIA2YOR080W 2199 nt3.04□□□□□ -1.92
CUZ1P53899 UTP14YML093W 2700 nt3.03□□□□□ -1.92
CUZ1P53899 tK(UUU)DtK(UUU)D 73 nt3.03□□□□□ -1.92
CUZ1P53899 tK(UUU)G1tK(UUU)G1 73 nt3.03□□□□□ -1.92
CUZ1P53899 tK(UUU)G2tK(UUU)G2 73 nt3.03□□□□□ -1.92
CUZ1P53899 tK(UUU)KtK(UUU)K 73 nt3.03□□□□□ -1.92
CUZ1P53899 tK(UUU)LtK(UUU)L 73 nt3.03□□□□□ -1.92
CUZ1P53899 tK(UUU)OtK(UUU)O 73 nt3.03□□□□□ -1.92
CUZ1P53899 tK(UUU)PtK(UUU)P 73 nt3.03□□□□□ -1.92
CUZ1P53899 MDV1YJL112W 2145 nt3.03□□□□□ -1.92
CUZ1P53899 FRE2YKL220C 2136 nt3.03□□□□□ -1.92
CUZ1P53899 RPL42AYNL162W 321 nt3.03□□□□□ -1.92
CUZ1P53899 SNT1YCR033W 3681 nt3.03□□□□□ -1.92
CUZ1P53899 EPL1YFL024C 2499 nt3.02□□□□□ -1.93
CUZ1P53899 UBP14YBR058C 2346 nt3.02□□□□□ -1.93
CUZ1P53899 PIP2YOR363C 2991 nt3.02□□□□□ -1.93
CUZ1P53899 YHR073W-AYHR073W-A 177 nt3.02□□□□□ -1.93
CUZ1P53899 RGM1YMR182C 636 nt3.02□□□□□ -1.93
CUZ1P53899 GLC3YEL011W 2115 nt3.01□□□□□ -1.93
CUZ1P53899 KSP1YHR082C 3090 nt3.01□□□□□ -1.93
CUZ1P53899 PHM6YDR281C 315 nt3.01□□□□□ -1.93
CUZ1P53899 PAU10YDR542W 363 nt3.01□□□□□ -1.93
CUZ1P53899 PAU11YGL261C 363 nt3.01□□□□□ -1.93
CUZ1P53899 PAU4YLR461W 363 nt3.01□□□□□ -1.93
CUZ1P53899 YAT2YER024W 2772 nt3.01□□□□□ -1.93
CUZ1P53899 RRP5YMR229C 5190 nt3.01□□□□□ -1.93
CUZ1P53899 PTP3YER075C 2787 nt3□□□□□ -1.93
CUZ1P53899 snR76snR76 109 nt3□□□□□ -1.93
CUZ1P53899 STU1YBL034C 4542 nt3□□□□□ -1.93
CUZ1P53899 RRP12YPL012W 3687 nt2.99□□□□□ -1.93
CUZ1P53899 PUT3YKL015W 2940 nt2.99□□□□□ -1.93
CUZ1P53899 NOP10YHR072W-A 177 nt2.99□□□□□ -1.93
CUZ1P53899 RPL20AYMR242C 519 nt2.99□□□□□ -1.93
CUZ1P53899 YOL019W-AYOL019W-A 153 nt2.99□□□□□ -1.93
CUZ1P53899 CHS6YJL099W 2241 nt2.99□□□□□ -1.93
CUZ1P53899 SWI5YDR146C 2130 nt2.98□□□□□ -1.93
CUZ1P53899 INP52YNL106C 3552 nt2.98□□□□□ -1.93
CUZ1P53899 AUS1YOR011W 4185 nt2.98□□□□□ -1.93
CUZ1P53899 MYO3YKL129C 3819 nt2.98□□□□□ -1.93
CUZ1P53899 YKU80YMR106C 1890 nt2.98□□□□□ -1.93
CUZ1P53899 RIC1YLR039C 3171 nt2.98□□□□□ -1.93
CUZ1P53899 STE6YKL209C 3873 nt2.97□□□□□ -1.93
CUZ1P53899 FUN30YAL019W 3396 nt2.97□□□□□ -1.93
CUZ1P53899 STE23YLR389C 3084 nt2.97□□□□□ -1.93
CUZ1P53899 SBE22YHR103W 2559 nt2.97□□□□□ -1.93
CUZ1P53899 RPS30BYOR182C 192 nt2.97□□□□□ -1.93
CUZ1P53899 SMC3YJL074C 3693 nt2.97□□□□□ -1.93
CUZ1P53899 MTR4YJL050W 3222 nt2.97□□□□□ -1.93
CUZ1P53899 YPR089WYPR089W 2667 nt2.96□□□□□ -1.93
CUZ1P53899 LYS14YDR034C 2373 nt2.96□□□□□ -1.94
CUZ1P53899 YHR080CYHR080C 4038 nt2.96□□□□□ -1.94
CUZ1P53899 PKH1YDR490C 2301 nt2.96□□□□□ -1.94
CUZ1P53899 YCR038W-AYCR038W-A 126 nt2.96□□□□□ -1.94
CUZ1P53899 snR81snR81 201 nt2.96□□□□□ -1.94
CUZ1P53899 REC8YPR007C 2043 nt2.96□□□□□ -1.94
CUZ1P53899 RCO1YMR075W 2055 nt2.96□□□□□ -1.94
CUZ1P53899 SLD3YGL113W 2007 nt2.95□□□□□ -1.94
CUZ1P53899 YTA7YGR270W 4140 nt2.95□□□□□ -1.94
CUZ1P53899 SCH9YHR205W 2475 nt2.95□□□□□ -1.94
CUZ1P53899 PSY2YNL201C 2577 nt2.95□□□□□ -1.94
CUZ1P53899 PRP5YBR237W 2550 nt2.95□□□□□ -1.94
CUZ1P53899 DYN2YDR424C 279 nt2.95□□□□□ -1.94
CUZ1P53899 YFL065CYFL065C 309 nt2.95□□□□□ -1.94
CUZ1P53899 YPR203WYPR203W 309 nt2.95□□□□□ -1.94
CUZ1P53899 ZIP2YGL249W 2115 nt2.95□□□□□ -1.94
CUZ1P53899 KAP104YBR017C 2757 nt2.95□□□□□ -1.94
CUZ1P53899 HRD3YLR207W 2502 nt2.94□□□□□ -1.94
CUZ1P53899 ROG1YGL144C 2058 nt2.94□□□□□ -1.94
CUZ1P53899 RTT10YPL183C 3042 nt2.94□□□□□ -1.94
CUZ1P53899 STU2YLR045C 2667 nt2.94□□□□□ -1.94
CUZ1P53899 YAL067W-AYAL067W-A 228 nt2.94□□□□□ -1.94
CUZ1P53899 SUL1YBR294W 2580 nt2.94□□□□□ -1.94
CUZ1P53899 MAK21YDR060W 3078 nt2.94□□□□□ -1.94
CUZ1P53899 STT4YLR305C 5703 nt2.93□□□□□ -1.94
CUZ1P53899 KAP123YER110C 3342 nt2.93□□□□□ -1.94
CUZ1P53899 RIF1YBR275C 5751 nt2.93□□□□□ -1.94
CUZ1P53899 ZIP1YDR285W 2628 nt2.92□□□□□ -1.94
CUZ1P53899 COX12YLR038C 252 nt2.92□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 62.5 ms