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Protein–RNA interactions for Protein: P53829
CAF40, Protein CAF40, yeast
Predictions only
Length
373 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
CAF40
P53829
YMR045C
YMR045C
5268 nt
1.82
□□□□□ -2.12
CAF40
P53829
TOF2
YKR010C
2316 nt
1.82
□□□□□ -2.12
CAF40
P53829
YHR214C-B
YHR214C-B
5382 nt
1.81
□□□□□ -2.12
CAF40
P53829
SAP190
YKR028W
3102 nt
1.81
□□□□□ -2.12
CAF40
P53829
YKL118W
YKL118W
312 nt
1.81
□□□□□ -2.12
CAF40
P53829
YKL136W
YKL136W
399 nt
1.81
□□□□□ -2.12
CAF40
P53829
YPL229W
YPL229W
621 nt
1.81
□□□□□ -2.12
CAF40
P53829
MNL2
YLR057W
2550 nt
1.81
□□□□□ -2.12
CAF40
P53829
JIP5
YPR169W
1479 nt
1.81
□□□□□ -2.12
CAF40
P53829
SIR4
YDR227W
4077 nt
1.81
□□□□□ -2.12
CAF40
P53829
YBR184W
YBR184W
1572 nt
1.81
□□□□□ -2.12
CAF40
P53829
GUP1
YGL084C
1683 nt
1.8
□□□□□ -2.12
CAF40
P53829
SMY1
YKL079W
1971 nt
1.8
□□□□□ -2.12
CAF40
P53829
YDR008C
YDR008C
351 nt
1.8
□□□□□ -2.12
CAF40
P53829
CSN9
YDR179C
489 nt
1.8
□□□□□ -2.12
CAF40
P53829
YGR174W-A
YGR174W-A
87 nt
1.8
□□□□□ -2.12
CAF40
P53829
YKR075W-A
YKR075W-A
270 nt
1.8
□□□□□ -2.12
CAF40
P53829
YLR053C
YLR053C
327 nt
1.8
□□□□□ -2.12
CAF40
P53829
YOR072W-A
YOR072W-A
249 nt
1.8
□□□□□ -2.12
CAF40
P53829
KOG1
YHR186C
4674 nt
1.79
□□□□□ -2.12
CAF40
P53829
YBP1
YBR216C
2025 nt
1.79
□□□□□ -2.12
CAF40
P53829
snR70
snR70
164 nt
1.79
□□□□□ -2.12
CAF40
P53829
YHL041W
YHL041W
450 nt
1.79
□□□□□ -2.12
CAF40
P53829
RPL42B
YHR141C
321 nt
1.79
□□□□□ -2.12
CAF40
P53829
RPL42A
YNL162W
321 nt
1.79
□□□□□ -2.12
CAF40
P53829
YSY6
YBR162W-A
198 nt
1.79
□□□□□ -2.12
CAF40
P53829
TUS1
YLR425W
3924 nt
1.79
□□□□□ -2.12
CAF40
P53829
SGO1
YOR073W
1773 nt
1.78
□□□□□ -2.12
CAF40
P53829
YCR043C
YCR043C
384 nt
1.78
□□□□□ -2.12
CAF40
P53829
YDL062W
YDL062W
426 nt
1.78
□□□□□ -2.12
CAF40
P53829
YDR413C
YDR413C
576 nt
1.78
□□□□□ -2.12
CAF40
P53829
PRE4
YFR050C
801 nt
1.78
□□□□□ -2.12
CAF40
P53829
YNL114C
YNL114C
372 nt
1.78
□□□□□ -2.12
CAF40
P53829
SLM1
YIL105C
2061 nt
1.78
□□□□□ -2.13
CAF40
P53829
BUD2
YKL092C
3315 nt
1.78
□□□□□ -2.13
CAF40
P53829
SCP160
YJL080C
3669 nt
1.77
□□□□□ -2.13
CAF40
P53829
YER097W
YER097W
330 nt
1.77
□□□□□ -2.13
CAF40
P53829
YHL037C
YHL037C
402 nt
1.77
□□□□□ -2.13
CAF40
P53829
VPS34
YLR240W
2628 nt
1.77
□□□□□ -2.13
CAF40
P53829
PLC1
YPL268W
2610 nt
1.76
□□□□□ -2.13
CAF40
P53829
NOP53
YPL146C
1368 nt
1.76
□□□□□ -2.13
CAF40
P53829
MCM22
YJR135C
720 nt
1.76
□□□□□ -2.13
CAF40
P53829
RPS27A
YKL156W
249 nt
1.76
□□□□□ -2.13
CAF40
P53829
YBL012C
YBL012C
402 nt
1.76
□□□□□ -2.13
CAF40
P53829
RKM1
YPL208W
1752 nt
1.76
□□□□□ -2.13
CAF40
P53829
CDC60
YPL160W
3273 nt
1.76
□□□□□ -2.13
CAF40
P53829
SNF5
YBR289W
2718 nt
1.76
□□□□□ -2.13
CAF40
P53829
ATG9
YDL149W
2994 nt
1.76
□□□□□ -2.13
CAF40
P53829
ALK2
YBL009W
2031 nt
1.76
□□□□□ -2.13
CAF40
P53829
DFG16
YOR030W
1860 nt
1.75
□□□□□ -2.13
CAF40
P53829
PEX8
YGR077C
1770 nt
1.75
□□□□□ -2.13
CAF40
P53829
UTP22
YGR090W
3714 nt
1.75
□□□□□ -2.13
CAF40
P53829
PDR8
YLR266C
2106 nt
1.75
□□□□□ -2.13
CAF40
P53829
OSH6
YKR003W
1347 nt
1.75
□□□□□ -2.13
CAF40
P53829
YFL032W
YFL032W
321 nt
1.75
□□□□□ -2.13
CAF40
P53829
YHR007C-A
YHR007C-A
216 nt
1.75
□□□□□ -2.13
CAF40
P53829
YMR141W-A
YMR141W-A
225 nt
1.75
□□□□□ -2.13
CAF40
P53829
RPL36B
YPL249C-A
303 nt
1.75
□□□□□ -2.13
CAF40
P53829
YDR341C
YDR341C
1824 nt
1.75
□□□□□ -2.13
CAF40
P53829
MYO2
YOR326W
4725 nt
1.74
□□□□□ -2.13
CAF40
P53829
PXA2
YKL188C
2562 nt
1.74
□□□□□ -2.13
CAF40
P53829
GRR1
YJR090C
3456 nt
1.74
□□□□□ -2.13
CAF40
P53829
RPL35A
YDL191W
363 nt
1.74
□□□□□ -2.13
CAF40
P53829
RPL37B
YDR500C
267 nt
1.74
□□□□□ -2.13
CAF40
P53829
YHR210C
YHR210C
1026 nt
1.74
□□□□□ -2.13
CAF40
P53829
TMA10
YLR327C
261 nt
1.74
□□□□□ -2.13
CAF40
P53829
SAR1
YPL218W
573 nt
1.74
□□□□□ -2.13
CAF40
P53829
snR36
snR36
182 nt
1.74
□□□□□ -2.13
CAF40
P53829
BPH1
YCR032W
6504 nt
1.74
□□□□□ -2.13
CAF40
P53829
CAT2
YML042W
2013 nt
1.73
□□□□□ -2.13
CAF40
P53829
PAU18
YLL064C
363 nt
1.73
□□□□□ -2.13
CAF40
P53829
YMR247W-A
YMR247W-A
144 nt
1.73
□□□□□ -2.13
CAF40
P53829
CYB5
YNL111C
363 nt
1.73
□□□□□ -2.13
CAF40
P53829
PAU6
YNR076W
363 nt
1.73
□□□□□ -2.13
CAF40
P53829
HHT1
YBR010W
411 nt
1.73
□□□□□ -2.13
CAF40
P53829
YOR199W
YOR199W
330 nt
1.73
□□□□□ -2.13
CAF40
P53829
YCL046W
YCL046W
324 nt
1.73
□□□□□ -2.13
CAF40
P53829
IRR1
YIL026C
3453 nt
1.73
□□□□□ -2.13
CAF40
P53829
SYH1
YPL105C
2550 nt
1.73
□□□□□ -2.13
CAF40
P53829
VTC3
YPL019C
2508 nt
1.73
□□□□□ -2.13
CAF40
P53829
UBR2
YLR024C
5619 nt
1.72
□□□□□ -2.13
CAF40
P53829
BUB1
YGR188C
3066 nt
1.72
□□□□□ -2.13
CAF40
P53829
tT(UGU)H
tT(UGU)H
72 nt
1.72
□□□□□ -2.13
CAF40
P53829
MF(ALPHA)1
YPL187W
498 nt
1.72
□□□□□ -2.13
CAF40
P53829
LHS1
YKL073W
2646 nt
1.72
□□□□□ -2.13
CAF40
P53829
UBP1
YDL122W
2430 nt
1.72
□□□□□ -2.13
CAF40
P53829
PUT3
YKL015W
2940 nt
1.72
□□□□□ -2.13
CAF40
P53829
CFT2
YLR115W
2580 nt
1.71
□□□□□ -2.14
CAF40
P53829
CYC7
YEL039C
342 nt
1.71
□□□□□ -2.14
CAF40
P53829
YKL183C-A
YKL183C-A
213 nt
1.71
□□□□□ -2.14
CAF40
P53829
UPS1
YLR193C
528 nt
1.71
□□□□□ -2.14
CAF40
P53829
YMR193C-A
YMR193C-A
387 nt
1.71
□□□□□ -2.14
CAF40
P53829
NUT2
YPR168W
474 nt
1.71
□□□□□ -2.14
CAF40
P53829
ARP7
YPR034W
1434 nt
1.71
□□□□□ -2.14
CAF40
P53829
MVP1
YMR004W
1536 nt
1.71
□□□□□ -2.14
CAF40
P53829
ZRG8
YER033C
3231 nt
1.7
□□□□□ -2.14
CAF40
P53829
IRC20
YLR247C
4671 nt
1.7
□□□□□ -2.14
CAF40
P53829
RPH1
YER169W
2391 nt
1.7
□□□□□ -2.14
CAF40
P53829
UTP21
YLR409C
2820 nt
1.7
□□□□□ -2.14
CAF40
P53829
GCN4
YEL009C
846 nt
1.7
□□□□□ -2.14
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Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms