Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.72■□□□□ 0.91
ITGA8P53708 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.72■□□□□ 0.91
ITGA8P53708 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.72■□□□□ 0.91
ITGA8P53708 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ITGA8P53708 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.71■□□□□ 0.91
ITGA8P53708 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.71■□□□□ 0.91
ITGA8P53708 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ITGA8P53708 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.71■□□□□ 0.91
ITGA8P53708 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.71■□□□□ 0.91
ITGA8P53708 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.71■□□□□ 0.91
ITGA8P53708 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.71■□□□□ 0.91
ITGA8P53708 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.71■□□□□ 0.91
ITGA8P53708 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ITGA8P53708 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITGA8P53708 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.7■□□□□ 0.9
ITGA8P53708 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.7■□□□□ 0.9
ITGA8P53708 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ITGA8P53708 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.7■□□□□ 0.9
ITGA8P53708 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.7■□□□□ 0.9
ITGA8P53708 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
ITGA8P53708 AC007322.3-201ENST00000426526 701 ntBASIC20.7■□□□□ 0.9
ITGA8P53708 CCDC92B-201ENST00000575506 885 ntBASIC20.7■□□□□ 0.9
ITGA8P53708 LINC02228-203ENST00000641970 1355 ntBASIC20.7■□□□□ 0.9
ITGA8P53708 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITGA8P53708 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA8P53708 BX119927.1-201ENST00000636596 1552 ntBASIC20.69■□□□□ 0.9
ITGA8P53708 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 TMEM179-206ENST00000616017 1645 ntBASIC20.69■□□□□ 0.9
ITGA8P53708 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA8P53708 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ITGA8P53708 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA8P53708 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA8P53708 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA8P53708 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA8P53708 RBM17P2-201ENST00000616397 1405 ntBASIC20.69■□□□□ 0.9
ITGA8P53708 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA8P53708 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGA8P53708 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ITGA8P53708 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGA8P53708 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ITGA8P53708 AC105265.2-201ENST00000467189 838 ntBASIC20.68■□□□□ 0.9
ITGA8P53708 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.68■□□□□ 0.9
ITGA8P53708 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.68■□□□□ 0.9
ITGA8P53708 KRT18P20-201ENST00000548986 1279 ntBASIC20.68■□□□□ 0.9
ITGA8P53708 AC243732.1-201ENST00000612648 864 ntBASIC20.68■□□□□ 0.9
ITGA8P53708 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGA8P53708 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ITGA8P53708 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ITGA8P53708 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA8P53708 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA8P53708 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA8P53708 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGA8P53708 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ITGA8P53708 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA8P53708 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA8P53708 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGA8P53708 AC018445.3-201ENST00000624177 1945 ntBASIC20.67■□□□□ 0.9
ITGA8P53708 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ITGA8P53708 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA8P53708 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA8P53708 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms