Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
ZNF140P52738 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
ZNF140P52738 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF140P52738 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF140P52738 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZNF140P52738 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF140P52738 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF140P52738 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF140P52738 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
ZNF140P52738 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 MIPEPP3-201ENST00000412105 444 ntBASIC20.17■□□□□ 0.82
ZNF140P52738 TSPY6P-201ENST00000448518 926 ntBASIC20.17■□□□□ 0.82
ZNF140P52738 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF140P52738 C2orf69P4-201ENST00000565394 541 ntBASIC20.17■□□□□ 0.82
ZNF140P52738 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.17■□□□□ 0.82
ZNF140P52738 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF140P52738 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF140P52738 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF140P52738 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF140P52738 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF140P52738 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF140P52738 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF140P52738 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.16■□□□□ 0.82
ZNF140P52738 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF140P52738 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ZNF140P52738 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF140P52738 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZNF140P52738 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF140P52738 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
ZNF140P52738 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF140P52738 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF140P52738 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF140P52738 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ZNF140P52738 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF140P52738 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF140P52738 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZNF140P52738 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ZNF140P52738 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF140P52738 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF140P52738 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ZNF140P52738 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF140P52738 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
ZNF140P52738 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF140P52738 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF140P52738 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF140P52738 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZNF140P52738 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZNF140P52738 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF140P52738 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF140P52738 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ZNF140P52738 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF140P52738 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF140P52738 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF140P52738 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.14■□□□□ 0.81
ZNF140P52738 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF140P52738 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.14■□□□□ 0.81
ZNF140P52738 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF140P52738 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF140P52738 AL391422.3-201ENST00000603791 2761 ntBASIC20.14■□□□□ 0.81
ZNF140P52738 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF140P52738 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ZNF140P52738 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF140P52738 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF140P52738 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF140P52738 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF140P52738 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF140P52738 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF140P52738 SLC29A4P1-201ENST00000398760 971 ntBASIC20.13■□□□□ 0.81
ZNF140P52738 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.13■□□□□ 0.81
ZNF140P52738 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.13■□□□□ 0.81
ZNF140P52738 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF140P52738 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF140P52738 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.13■□□□□ 0.81
ZNF140P52738 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF140P52738 AC092118.2-201ENST00000613495 667 ntBASIC20.13■□□□□ 0.81
ZNF140P52738 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF140P52738 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF140P52738 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF140P52738 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZNF140P52738 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.12■□□□□ 0.81
ZNF140P52738 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF140P52738 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms