Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN2P51788 AL162377.1-201ENST00000618844 1793 ntBASIC19.54■□□□□ 0.72
CLCN2P51788 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN2P51788 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN2P51788 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN2P51788 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 KRT16P2-201ENST00000414673 1423 ntBASIC19.53■□□□□ 0.72
CLCN2P51788 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN2P51788 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN2P51788 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN2P51788 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN2P51788 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
CLCN2P51788 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.53■□□□□ 0.72
CLCN2P51788 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN2P51788 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCN2P51788 AC231657.2-201ENST00000624556 255 ntBASIC19.53■□□□□ 0.72
CLCN2P51788 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN2P51788 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN2P51788 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLCN2P51788 LETM1P2-201ENST00000597330 2178 ntBASIC19.53■□□□□ 0.72
CLCN2P51788 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN2P51788 AC020907.5-201ENST00000624372 1936 ntBASIC19.53■□□□□ 0.72
CLCN2P51788 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN2P51788 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN2P51788 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN2P51788 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN2P51788 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN2P51788 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 DUX4L16-201ENST00000555130 1264 ntBASIC19.52■□□□□ 0.72
CLCN2P51788 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN2P51788 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN2P51788 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN2P51788 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.52■□□□□ 0.71
CLCN2P51788 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CLCN2P51788 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN2P51788 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.52■□□□□ 0.71
CLCN2P51788 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN2P51788 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.52■□□□□ 0.71
CLCN2P51788 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLCN2P51788 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLCN2P51788 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.51■□□□□ 0.71
CLCN2P51788 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.51■□□□□ 0.71
CLCN2P51788 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN2P51788 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN2P51788 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.51■□□□□ 0.71
CLCN2P51788 RAP2CP1-201ENST00000605103 478 ntBASIC19.51■□□□□ 0.71
CLCN2P51788 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.51■□□□□ 0.71
CLCN2P51788 AC010536.3-201ENST00000620306 533 ntBASIC19.51■□□□□ 0.71
CLCN2P51788 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 AC061975.6-201ENST00000579045 1553 ntBASIC19.51■□□□□ 0.71
CLCN2P51788 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLCN2P51788 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLCN2P51788 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN2P51788 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN2P51788 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLCN2P51788 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN2P51788 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCN2P51788 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN2P51788 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLCN2P51788 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN2P51788 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN2P51788 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLCN2P51788 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN2P51788 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN2P51788 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms