Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 SLC7A5P2-201ENST00000553010 536 ntBASIC20.99■□□□□ 0.95
FNTAP49354 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.99■□□□□ 0.95
FNTAP49354 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
FNTAP49354 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FNTAP49354 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
FNTAP49354 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
FNTAP49354 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FNTAP49354 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.98■□□□□ 0.95
FNTAP49354 AC027612.3-201ENST00000413684 1047 ntBASIC20.98■□□□□ 0.95
FNTAP49354 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.98■□□□□ 0.95
FNTAP49354 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.98■□□□□ 0.95
FNTAP49354 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
FNTAP49354 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FNTAP49354 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.98■□□□□ 0.95
FNTAP49354 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FNTAP49354 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FNTAP49354 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.97■□□□□ 0.95
FNTAP49354 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FNTAP49354 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FNTAP49354 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
FNTAP49354 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FNTAP49354 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.97■□□□□ 0.95
FNTAP49354 CCDC92B-201ENST00000575506 885 ntBASIC20.97■□□□□ 0.95
FNTAP49354 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
FNTAP49354 AC243732.1-201ENST00000612648 864 ntBASIC20.97■□□□□ 0.95
FNTAP49354 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
FNTAP49354 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
FNTAP49354 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FNTAP49354 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
FNTAP49354 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
FNTAP49354 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.96■□□□□ 0.95
FNTAP49354 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 AP001160.3-201ENST00000601484 763 ntBASIC20.96■□□□□ 0.95
FNTAP49354 AC104187.1-201ENST00000607510 612 ntBASIC20.96■□□□□ 0.95
FNTAP49354 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.96■□□□□ 0.95
FNTAP49354 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
FNTAP49354 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNTAP49354 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.96■□□□□ 0.95
FNTAP49354 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.95■□□□□ 0.95
FNTAP49354 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 AC091799.1-201ENST00000422823 811 ntBASIC20.95■□□□□ 0.94
FNTAP49354 KRT18P20-201ENST00000548986 1279 ntBASIC20.95■□□□□ 0.94
FNTAP49354 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.95■□□□□ 0.94
FNTAP49354 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 DPP3P2-201ENST00000416030 1696 ntBASIC20.95■□□□□ 0.94
FNTAP49354 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNTAP49354 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.95■□□□□ 0.94
FNTAP49354 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
FNTAP49354 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms