Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 INO80YGL150C 4470 nt1.8□□□□□ -2.12
SSN8P47821 RPL9BYNL067W 576 nt1.8□□□□□ -2.12
SSN8P47821 YOL159C-AYOL159C-A 273 nt1.8□□□□□ -2.12
SSN8P47821 YPL182CYPL182C 384 nt1.8□□□□□ -2.12
SSN8P47821 YJL020W-AYJL020W-A 258 nt1.79□□□□□ -2.12
SSN8P47821 YPR016W-AYPR016W-A 261 nt1.79□□□□□ -2.12
SSN8P47821 YDR341CYDR341C 1824 nt1.79□□□□□ -2.12
SSN8P47821 CAT2YML042W 2013 nt1.78□□□□□ -2.12
SSN8P47821 YCR043CYCR043C 384 nt1.78□□□□□ -2.12
SSN8P47821 DAD4YDR320C-A 219 nt1.78□□□□□ -2.12
SSN8P47821 RPL37BYDR500C 267 nt1.78□□□□□ -2.12
SSN8P47821 YGR035CYGR035C 351 nt1.78□□□□□ -2.12
SSN8P47821 RPS20YHL015W 366 nt1.78□□□□□ -2.12
SSN8P47821 RPL42BYHR141C 321 nt1.78□□□□□ -2.12
SSN8P47821 tW(UCA)QtW(UCA)Q 74 nt1.78□□□□□ -2.12
SSN8P47821 MCM22YJR135C 720 nt1.78□□□□□ -2.12
SSN8P47821 YBL012CYBL012C 402 nt1.78□□□□□ -2.12
SSN8P47821 RPL42AYNL162W 321 nt1.78□□□□□ -2.12
SSN8P47821 MNL2YLR057W 2550 nt1.78□□□□□ -2.12
SSN8P47821 YBR184WYBR184W 1572 nt1.77□□□□□ -2.13
SSN8P47821 UBR2YLR024C 5619 nt1.77□□□□□ -2.13
SSN8P47821 YDR008CYDR008C 351 nt1.77□□□□□ -2.13
SSN8P47821 TIM13YGR181W 318 nt1.77□□□□□ -2.13
SSN8P47821 YPL225WYPL225W 441 nt1.77□□□□□ -2.13
SSN8P47821 YPR197CYPR197C 564 nt1.77□□□□□ -2.13
SSN8P47821 SSQ1YLR369W 1974 nt1.77□□□□□ -2.13
SSN8P47821 SYH1YPL105C 2550 nt1.77□□□□□ -2.13
SSN8P47821 OSH6YKR003W 1347 nt1.76□□□□□ -2.13
SSN8P47821 YNL114CYNL114C 372 nt1.76□□□□□ -2.13
SSN8P47821 PGA1YNL158W 597 nt1.76□□□□□ -2.13
SSN8P47821 MF(ALPHA)1YPL187W 498 nt1.76□□□□□ -2.13
SSN8P47821 HIR3YJR140C 4947 nt1.76□□□□□ -2.13
SSN8P47821 CFT2YLR115W 2580 nt1.76□□□□□ -2.13
SSN8P47821 YLR035C-AYLR035C-A 3468 nt1.76□□□□□ -2.13
SSN8P47821 SLM1YIL105C 2061 nt1.76□□□□□ -2.13
SSN8P47821 UBP1YDL122W 2430 nt1.76□□□□□ -2.13
SSN8P47821 UTP21YLR409C 2820 nt1.76□□□□□ -2.13
SSN8P47821 TOF2YKR010C 2316 nt1.75□□□□□ -2.13
SSN8P47821 GUP1YGL084C 1683 nt1.75□□□□□ -2.13
SSN8P47821 ATP7YKL016C 525 nt1.75□□□□□ -2.13
SSN8P47821 YKL083WYKL083W 615 nt1.75□□□□□ -2.13
SSN8P47821 PAU18YLL064C 363 nt1.75□□□□□ -2.13
SSN8P47821 YML003WYML003W 873 nt1.75□□□□□ -2.13
SSN8P47821 CGI121YML036W 546 nt1.75□□□□□ -2.13
SSN8P47821 YNL058CYNL058C 951 nt1.75□□□□□ -2.13
SSN8P47821 CYB5YNL111C 363 nt1.75□□□□□ -2.13
SSN8P47821 YBL073WYBL073W 312 nt1.75□□□□□ -2.13
SSN8P47821 PAU6YNR076W 363 nt1.75□□□□□ -2.13
SSN8P47821 SMY1YKL079W 1971 nt1.75□□□□□ -2.13
SSN8P47821 ARP7YPR034W 1434 nt1.74□□□□□ -2.13
SSN8P47821 YNL144CYNL144C 2223 nt1.74□□□□□ -2.13
SSN8P47821 YJR003CYJR003C 1560 nt1.74□□□□□ -2.13
SSN8P47821 MRPL31YKL138C 396 nt1.74□□□□□ -2.13
SSN8P47821 YCL046WYCL046W 324 nt1.74□□□□□ -2.13
SSN8P47821 HER1YOR227W 3741 nt1.74□□□□□ -2.13
SSN8P47821 YCR087C-AYCR087C-A 462 nt1.73□□□□□ -2.13
SSN8P47821 RTR1YER139C 681 nt1.73□□□□□ -2.13
SSN8P47821 BRP1YGL007W 378 nt1.73□□□□□ -2.13
SSN8P47821 YAR053WYAR053W 297 nt1.73□□□□□ -2.13
SSN8P47821 YMR141W-AYMR141W-A 225 nt1.73□□□□□ -2.13
SSN8P47821 VPS34YLR240W 2628 nt1.73□□□□□ -2.13
SSN8P47821 PEP1YBL017C 4740 nt1.73□□□□□ -2.13
SSN8P47821 NOP53YPL146C 1368 nt1.72□□□□□ -2.13
SSN8P47821 PAC1YOR269W 1485 nt1.72□□□□□ -2.13
SSN8P47821 PRE4YFR050C 801 nt1.72□□□□□ -2.13
SSN8P47821 YHL041WYHL041W 450 nt1.72□□□□□ -2.13
SSN8P47821 IRC23YOR044W 474 nt1.72□□□□□ -2.13
SSN8P47821 VPS15YBR097W 4365 nt1.72□□□□□ -2.13
SSN8P47821 NAM7YMR080C 2916 nt1.72□□□□□ -2.13
SSN8P47821 AIM9YER080W 1884 nt1.71□□□□□ -2.14
SSN8P47821 PXA2YKL188C 2562 nt1.71□□□□□ -2.14
SSN8P47821 YER172C-AYER172C-A 381 nt1.71□□□□□ -2.14
SSN8P47821 YHR052W-AYHR052W-A 195 nt1.71□□□□□ -2.14
SSN8P47821 YHR054W-AYHR054W-A 195 nt1.71□□□□□ -2.14
SSN8P47821 IRR1YIL026C 3453 nt1.71□□□□□ -2.14
SSN8P47821 HCS1YKL017C 2052 nt1.7□□□□□ -2.14
SSN8P47821 CSN9YDR179C 489 nt1.7□□□□□ -2.14
SSN8P47821 YAF9YNL107W 681 nt1.7□□□□□ -2.14
SSN8P47821 PKH3YDR466W 2697 nt1.7□□□□□ -2.14
SSN8P47821 GYP5YPL249C 2685 nt1.7□□□□□ -2.14
SSN8P47821 SEC31YDL195W 3822 nt1.7□□□□□ -2.14
SSN8P47821 SNF5YBR289W 2718 nt1.69□□□□□ -2.14
SSN8P47821 RPH1YER169W 2391 nt1.69□□□□□ -2.14
SSN8P47821 EMP24YGL200C 612 nt1.69□□□□□ -2.14
SSN8P47821 TIM18YOR297C 579 nt1.69□□□□□ -2.14
SSN8P47821 SAR1YPL218W 573 nt1.69□□□□□ -2.14
SSN8P47821 YPL229WYPL229W 621 nt1.69□□□□□ -2.14
SSN8P47821 PET309YLR067C 2898 nt1.69□□□□□ -2.14
SSN8P47821 MON2YNL297C 4911 nt1.69□□□□□ -2.14
SSN8P47821 FAB1YFR019W 6837 nt1.69□□□□□ -2.14
SSN8P47821 HSH155YMR288W 2916 nt1.68□□□□□ -2.14
SSN8P47821 PEX8YGR077C 1770 nt1.68□□□□□ -2.14
SSN8P47821 MVP1YMR004W 1536 nt1.68□□□□□ -2.14
SSN8P47821 YKL183C-AYKL183C-A 213 nt1.68□□□□□ -2.14
SSN8P47821 YOR072W-AYOR072W-A 249 nt1.68□□□□□ -2.14
SSN8P47821 MSC6YOR354C 2079 nt1.67□□□□□ -2.14
SSN8P47821 CYC7YEL039C 342 nt1.67□□□□□ -2.14
SSN8P47821 YER088C-AYER088C-A 324 nt1.67□□□□□ -2.14
SSN8P47821 YGR174W-AYGR174W-A 87 nt1.67□□□□□ -2.14
SSN8P47821 TDA9YML081W 3756 nt1.67□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms