Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 VPS52YDR484W 1926 nt-0.09□□□□□ -2.42
TY1B-JR1P47098 SDH2YLL041C 801 nt-0.09□□□□□ -2.42
TY1B-JR1P47098 YOL024WYOL024W 519 nt-0.09□□□□□ -2.42
TY1B-JR1P47098 NPR2YEL062W 1848 nt-0.09□□□□□ -2.42
TY1B-JR1P47098 VAB2YEL005C 849 nt-0.09□□□□□ -2.42
TY1B-JR1P47098 YOR199WYOR199W 330 nt-0.09□□□□□ -2.42
TY1B-JR1P47098 YBR076C-AYBR076C-A 267 nt-0.09□□□□□ -2.42
TY1B-JR1P47098 YAL064WYAL064W 285 nt-0.1□□□□□ -2.43
TY1B-JR1P47098 YLR031WYLR031W 561 nt-0.1□□□□□ -2.43
TY1B-JR1P47098 ENV11YGR071C 2583 nt-0.1□□□□□ -2.43
TY1B-JR1P47098 SWI5YDR146C 2130 nt-0.1□□□□□ -2.43
TY1B-JR1P47098 BFR2YDR299W 1605 nt-0.11□□□□□ -2.43
TY1B-JR1P47098 ALG13YGL047W 609 nt-0.11□□□□□ -2.43
TY1B-JR1P47098 YMR173W-AYMR173W-A 1185 nt-0.11□□□□□ -2.43
TY1B-JR1P47098 DDR48YMR173W 1293 nt-0.11□□□□□ -2.43
TY1B-JR1P47098 ATP18YML081C-A 180 nt-0.11□□□□□ -2.43
TY1B-JR1P47098 DLT1YMR126C 1029 nt-0.11□□□□□ -2.43
TY1B-JR1P47098 STO1YMR125W 2586 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 NOC3YLR002C 1992 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 SSS1YDR086C 243 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 YHL048C-AYHL048C-A 135 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 RPC10YHR143W-A 213 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 TIM8YJR135W-A 264 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 COX12YLR038C 252 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 YLR232WYLR232W 348 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 ROX1YPR065W 1107 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 CHS6YJL099W 2241 nt-0.12□□□□□ -2.43
TY1B-JR1P47098 CHZ1YER030W 462 nt-0.13□□□□□ -2.43
TY1B-JR1P47098 YER046W-AYER046W-A 330 nt-0.13□□□□□ -2.43
TY1B-JR1P47098 YLR311CYLR311C 348 nt-0.13□□□□□ -2.43
TY1B-JR1P47098 SPR2YOR214C 711 nt-0.13□□□□□ -2.43
TY1B-JR1P47098 PEP3YLR148W 2757 nt-0.13□□□□□ -2.43
TY1B-JR1P47098 YDR262WYDR262W 819 nt-0.14□□□□□ -2.43
TY1B-JR1P47098 YJL007CYJL007C 315 nt-0.14□□□□□ -2.43
TY1B-JR1P47098 YBP2YGL060W 1926 nt-0.14□□□□□ -2.43
TY1B-JR1P47098 YCR016WYCR016W 873 nt-0.14□□□□□ -2.43
TY1B-JR1P47098 YGR164WYGR164W 336 nt-0.14□□□□□ -2.43
TY1B-JR1P47098 SAG1YJR004C 1953 nt-0.14□□□□□ -2.43
TY1B-JR1P47098 AIM44YPL158C 2277 nt-0.15□□□□□ -2.43
TY1B-JR1P47098 PRP5YBR237W 2550 nt-0.15□□□□□ -2.43
TY1B-JR1P47098 MET32YDR253C 576 nt-0.15□□□□□ -2.43
TY1B-JR1P47098 SLD5YDR489W 885 nt-0.15□□□□□ -2.43
TY1B-JR1P47098 AEP1YMR064W 1557 nt-0.15□□□□□ -2.43
TY1B-JR1P47098 PDE2YOR360C 1581 nt-0.15□□□□□ -2.43
TY1B-JR1P47098 IPI3YNL182C 1668 nt-0.15□□□□□ -2.43
TY1B-JR1P47098 YGR204C-AYGR204C-A 114 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YKL065W-AYKL065W-A 222 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YKL183C-AYKL183C-A 213 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 RUF22RUF22 515 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YDR034C-CYDR034C-C 1317 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YFL002W-BYFL002W-B 1317 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YGR161W-AYGR161W-A 1317 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YLR410W-AYLR410W-A 1317 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YBL100W-AYBL100W-A 1317 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 YCL020WYCL020W 1317 nt-0.16□□□□□ -2.43
TY1B-JR1P47098 NTF2YER009W 378 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 NEJ1YLR265C 1029 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 RCN2YOR220W 798 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 YPR153WYPR153W 423 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 ARP9YMR033W 1404 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 YGR265WYGR265W 411 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 BIG1YHR101C 1008 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 COX3Q0275 810 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 YOR108C-AYOR108C-A 210 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 SCW11YGL028C 1629 nt-0.17□□□□□ -2.44
TY1B-JR1P47098 SLD3YGL113W 2007 nt-0.18□□□□□ -2.44
TY1B-JR1P47098 KAR3YPR141C 2190 nt-0.18□□□□□ -2.44
TY1B-JR1P47098 DPB11YJL090C 2295 nt-0.18□□□□□ -2.44
TY1B-JR1P47098 NOT5YPR072W 1683 nt-0.19□□□□□ -2.44
TY1B-JR1P47098 MAM1YER106W 909 nt-0.19□□□□□ -2.44
TY1B-JR1P47098 MRPL24YMR193W 777 nt-0.19□□□□□ -2.44
TY1B-JR1P47098 PET111YMR257C 2403 nt-0.19□□□□□ -2.44
TY1B-JR1P47098 RPL26AYLR344W 384 nt-0.19□□□□□ -2.44
TY1B-JR1P47098 NTC20YBR188C 423 nt-0.19□□□□□ -2.44
TY1B-JR1P47098 RPL26BYGR034W 384 nt-0.2□□□□□ -2.44
TY1B-JR1P47098 NOP9YJL010C 2001 nt-0.21□□□□□ -2.44
TY1B-JR1P47098 TFB5YDR079C-A 219 nt-0.21□□□□□ -2.44
TY1B-JR1P47098 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
TY1B-JR1P47098 VMA21YGR105W 234 nt-0.21□□□□□ -2.44
TY1B-JR1P47098 YIL134C-AYIL134C-A 204 nt-0.21□□□□□ -2.44
TY1B-JR1P47098 IST3YIR005W 447 nt-0.21□□□□□ -2.44
TY1B-JR1P47098 snR84snR84 550 nt-0.22□□□□□ -2.44
TY1B-JR1P47098 YBR051WYBR051W 351 nt-0.22□□□□□ -2.44
TY1B-JR1P47098 OCA6YDR067C 675 nt-0.22□□□□□ -2.45
TY1B-JR1P47098 YOR105WYOR105W 327 nt-0.22□□□□□ -2.45
TY1B-JR1P47098 YBR221W-AYBR221W-A 105 nt-0.22□□□□□ -2.45
TY1B-JR1P47098 AI4Q0065 1671 nt-0.22□□□□□ -2.45
TY1B-JR1P47098 SBH1YER087C-B 249 nt-0.23□□□□□ -2.45
TY1B-JR1P47098 SPO11YHL022C 1197 nt-0.23□□□□□ -2.45
TY1B-JR1P47098 YHL009W-BYHL009W-B 5409 nt-0.24□□□□□ -2.45
TY1B-JR1P47098 YJL114WYJL114W 681 nt-0.24□□□□□ -2.45
TY1B-JR1P47098 YKE2YLR200W 345 nt-0.24□□□□□ -2.45
TY1B-JR1P47098 YNL162W-AYNL162W-A 219 nt-0.24□□□□□ -2.45
TY1B-JR1P47098 PRP42YDR235W 1635 nt-0.25□□□□□ -2.45
TY1B-JR1P47098 YDL009CYDL009C 324 nt-0.25□□□□□ -2.45
TY1B-JR1P47098 YKL136WYKL136W 399 nt-0.25□□□□□ -2.45
TY1B-JR1P47098 SUT2YPR009W 807 nt-0.25□□□□□ -2.45
TY1B-JR1P47098 MMS4YBR098W 2076 nt-0.26□□□□□ -2.45
TY1B-JR1P47098 YPR170CYPR170C 336 nt-0.26□□□□□ -2.45
TY1B-JR1P47098 snR46snR46 197 nt-0.26□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms