Protein–RNA interactions for Protein: P38790

HTD2, Hydroxyacyl-thioester dehydratase type 2, mitochondrial, yeastyeast

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HTD2P38790 tT(AGU)BtT(AGU)B 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)CtT(AGU)C 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)DtT(AGU)D 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)HtT(AGU)H 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)I1tT(AGU)I1 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)I2tT(AGU)I2 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)JtT(AGU)J 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)N1tT(AGU)N1 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)N2tT(AGU)N2 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)O1tT(AGU)O1 73 nt0.57□□□□□ -2.32
HTD2P38790 tT(AGU)O2tT(AGU)O2 73 nt0.57□□□□□ -2.32
HTD2P38790 NBL1YHR199C-A 222 nt0.57□□□□□ -2.32
HTD2P38790 PAM16YJL104W 450 nt0.57□□□□□ -2.32
HTD2P38790 YMR272W-AYMR272W-A 114 nt0.57□□□□□ -2.32
HTD2P38790 MPT5YGL178W 2580 nt0.57□□□□□ -2.32
HTD2P38790 NOC3YLR002C 1992 nt0.57□□□□□ -2.32
HTD2P38790 YDL073WYDL073W 2955 nt0.56□□□□□ -2.32
HTD2P38790 YBR221W-AYBR221W-A 105 nt0.56□□□□□ -2.32
HTD2P38790 TMA22YJR014W 597 nt0.55□□□□□ -2.32
HTD2P38790 CMC1YKL137W 336 nt0.55□□□□□ -2.32
HTD2P38790 VPS52YDR484W 1926 nt0.55□□□□□ -2.32
HTD2P38790 RIM20YOR275C 1986 nt0.55□□□□□ -2.32
HTD2P38790 SMB1YER029C 591 nt0.54□□□□□ -2.32
HTD2P38790 YOL106WYOL106W 354 nt0.54□□□□□ -2.32
HTD2P38790 YOP1YPR028W 543 nt0.54□□□□□ -2.32
HTD2P38790 YPR159C-AYPR159C-A 102 nt0.54□□□□□ -2.32
HTD2P38790 YBR200W-AYBR200W-A 165 nt0.54□□□□□ -2.32
HTD2P38790 APL2YKL135C 2181 nt0.54□□□□□ -2.32
HTD2P38790 SET3YKR029C 2256 nt0.54□□□□□ -2.32
HTD2P38790 ZIP1YDR285W 2628 nt0.53□□□□□ -2.32
HTD2P38790 YDL206WYDL206W 2289 nt0.53□□□□□ -2.32
HTD2P38790 YHR028W-AYHR028W-A 321 nt0.53□□□□□ -2.32
HTD2P38790 YMR031W-AYMR031W-A 327 nt0.53□□□□□ -2.32
HTD2P38790 YBL068W-AYBL068W-A 237 nt0.53□□□□□ -2.32
HTD2P38790 YPR147CYPR147C 915 nt0.53□□□□□ -2.32
HTD2P38790 SWI6YLR182W 2412 nt0.53□□□□□ -2.33
HTD2P38790 PIG1YLR273C 1947 nt0.52□□□□□ -2.33
HTD2P38790 RRI2YOL117W 1938 nt0.52□□□□□ -2.33
HTD2P38790 UTP20YBL004W 7482 nt0.52□□□□□ -2.33
HTD2P38790 YDR003W-AYDR003W-A 123 nt0.52□□□□□ -2.33
HTD2P38790 MXR1YER042W 555 nt0.52□□□□□ -2.33
HTD2P38790 YMR304C-AYMR304C-A 351 nt0.52□□□□□ -2.33
HTD2P38790 NUT2YPR168W 474 nt0.52□□□□□ -2.33
HTD2P38790 AIM44YPL158C 2277 nt0.52□□□□□ -2.33
HTD2P38790 SRP14YDL092W 441 nt0.51□□□□□ -2.33
HTD2P38790 snR79snR79 84 nt0.51□□□□□ -2.33
HTD2P38790 YDL152WYDL152W 366 nt0.51□□□□□ -2.33
HTD2P38790 YER158W-AYER158W-A 216 nt0.51□□□□□ -2.33
HTD2P38790 YGL109WYGL109W 324 nt0.51□□□□□ -2.33
HTD2P38790 tT(UGU)Q1tT(UGU)Q1 76 nt0.51□□□□□ -2.33
HTD2P38790 YMR175W-AYMR175W-A 195 nt0.51□□□□□ -2.33
HTD2P38790 COX7YMR256C 183 nt0.51□□□□□ -2.33
HTD2P38790 YNL150WYNL150W 408 nt0.51□□□□□ -2.33
HTD2P38790 PRP16YKR086W 3216 nt0.51□□□□□ -2.33
HTD2P38790 SWI5YDR146C 2130 nt0.5□□□□□ -2.33
HTD2P38790 YDL196WYDL196W 330 nt0.5□□□□□ -2.33
HTD2P38790 YHR054CYHR054C 1065 nt0.5□□□□□ -2.33
HTD2P38790 LIN1YHR156C 1023 nt0.5□□□□□ -2.33
HTD2P38790 YIL142C-AYIL142C-A 333 nt0.5□□□□□ -2.33
HTD2P38790 YOR199WYOR199W 330 nt0.5□□□□□ -2.33
HTD2P38790 RKR1YMR247C 4689 nt0.49□□□□□ -2.33
HTD2P38790 SAG1YJR004C 1953 nt0.49□□□□□ -2.33
HTD2P38790 YJR140W-AYJR140W-A 150 nt0.49□□□□□ -2.33
HTD2P38790 YBL062WYBL062W 381 nt0.49□□□□□ -2.33
HTD2P38790 RUF22RUF22 515 nt0.49□□□□□ -2.33
HTD2P38790 SWF1YDR126W 1011 nt0.48□□□□□ -2.33
HTD2P38790 BMT5YIL096C 1011 nt0.48□□□□□ -2.33
HTD2P38790 YLR217WYLR217W 324 nt0.48□□□□□ -2.33
HTD2P38790 YML009C-AYML009C-A 327 nt0.48□□□□□ -2.33
HTD2P38790 STO1YMR125W 2586 nt0.48□□□□□ -2.33
HTD2P38790 YOR029WYOR029W 336 nt0.47□□□□□ -2.33
HTD2P38790 YML002WYML002W 2214 nt0.46□□□□□ -2.34
HTD2P38790 FIG4YNL325C 2640 nt0.46□□□□□ -2.34
HTD2P38790 HNT1YDL125C 477 nt0.46□□□□□ -2.34
HTD2P38790 YEL018C-AYEL018C-A 534 nt0.46□□□□□ -2.34
HTD2P38790 STF2YGR008C 255 nt0.46□□□□□ -2.34
HTD2P38790 SLM6YBR266C 453 nt0.46□□□□□ -2.34
HTD2P38790 SCW11YGL028C 1629 nt0.46□□□□□ -2.34
HTD2P38790 YMR160WYMR160W 2451 nt0.45□□□□□ -2.34
HTD2P38790 PDE2YOR360C 1581 nt0.45□□□□□ -2.34
HTD2P38790 ALY2YJL084C 3141 nt0.45□□□□□ -2.34
HTD2P38790 YDR509WYDR509W 348 nt0.45□□□□□ -2.34
HTD2P38790 TIM10YHR005C-A 282 nt0.45□□□□□ -2.34
HTD2P38790 LRP1YHR081W 555 nt0.45□□□□□ -2.34
HTD2P38790 YPL197CYPL197C 414 nt0.45□□□□□ -2.34
HTD2P38790 MKT1YNL085W 2493 nt0.45□□□□□ -2.34
HTD2P38790 UTP10YJL109C 5310 nt0.44□□□□□ -2.34
HTD2P38790 AI5_ALPHAQ0070 1893 nt0.44□□□□□ -2.34
HTD2P38790 OCA6YDR067C 675 nt0.44□□□□□ -2.34
HTD2P38790 YDR114CYDR114C 303 nt0.44□□□□□ -2.34
HTD2P38790 QCR7YDR529C 384 nt0.44□□□□□ -2.34
HTD2P38790 YKL111CYKL111C 336 nt0.44□□□□□ -2.34
HTD2P38790 RPL38YLR325C 237 nt0.44□□□□□ -2.34
HTD2P38790 YMR013C-AYMR013C-A 150 nt0.44□□□□□ -2.34
HTD2P38790 YBR032WYBR032W 303 nt0.44□□□□□ -2.34
HTD2P38790 YPR170CYPR170C 336 nt0.44□□□□□ -2.34
HTD2P38790 MYO1YHR023W 5787 nt0.44□□□□□ -2.34
HTD2P38790 YER023C-AYER023C-A 213 nt0.43□□□□□ -2.34
HTD2P38790 HIT1YJR055W 495 nt0.43□□□□□ -2.34
HTD2P38790 LTE1YAL024C 4308 nt0.42□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms