Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 YBR141W-AYBR141W-A 96 nt4.5□□□□□ -1.69
RIM101P33400 IKI3YLR384C 4050 nt4.5□□□□□ -1.69
RIM101P33400 RAD34YDR314C 2079 nt4.5□□□□□ -1.69
RIM101P33400 SPT23YKL020C 3249 nt4.5□□□□□ -1.69
RIM101P33400 YIL002W-AYIL002W-A 210 nt4.48□□□□□ -1.69
RIM101P33400 YOR108C-AYOR108C-A 210 nt4.48□□□□□ -1.69
RIM101P33400 YNL018CYNL018C 1839 nt4.48□□□□□ -1.69
RIM101P33400 IRR1YIL026C 3453 nt4.48□□□□□ -1.69
RIM101P33400 OSH2YDL019C 3852 nt4.47□□□□□ -1.69
RIM101P33400 SPT4YGR063C 309 nt4.47□□□□□ -1.69
RIM101P33400 ULS1YOR191W 4860 nt4.47□□□□□ -1.69
RIM101P33400 CHS2YBR038W 2892 nt4.47□□□□□ -1.69
RIM101P33400 YLL054CYLL054C 2532 nt4.46□□□□□ -1.69
RIM101P33400 HSH155YMR288W 2916 nt4.46□□□□□ -1.69
RIM101P33400 RPB2YOR151C 3675 nt4.46□□□□□ -1.7
RIM101P33400 SWI3YJL176C 2478 nt4.46□□□□□ -1.7
RIM101P33400 YDR034C-AYDR034C-A 177 nt4.46□□□□□ -1.7
RIM101P33400 YGL182CYGL182C 324 nt4.46□□□□□ -1.7
RIM101P33400 HRD3YLR207W 2502 nt4.45□□□□□ -1.7
RIM101P33400 YPR022CYPR022C 3402 nt4.44□□□□□ -1.7
RIM101P33400 RAD4YER162C 2265 nt4.44□□□□□ -1.7
RIM101P33400 INP53YOR109W 3324 nt4.44□□□□□ -1.7
RIM101P33400 RAD5YLR032W 3510 nt4.44□□□□□ -1.7
RIM101P33400 YMR242W-AYMR242W-A 90 nt4.44□□□□□ -1.7
RIM101P33400 FAS2YPL231W 5664 nt4.44□□□□□ -1.7
RIM101P33400 MIT1YEL007W 2001 nt4.44□□□□□ -1.7
RIM101P33400 RGA2YDR379W 3030 nt4.44□□□□□ -1.7
RIM101P33400 PTP2YOR208W 2253 nt4.43□□□□□ -1.7
RIM101P33400 PRP6YBR055C 2700 nt4.43□□□□□ -1.7
RIM101P33400 TAE2YPL009C 3117 nt4.43□□□□□ -1.7
RIM101P33400 YGL140CYGL140C 3660 nt4.43□□□□□ -1.7
RIM101P33400 YKR075W-AYKR075W-A 270 nt4.43□□□□□ -1.7
RIM101P33400 CRM1YGR218W 3255 nt4.43□□□□□ -1.7
RIM101P33400 RRP6YOR001W 2202 nt4.42□□□□□ -1.7
RIM101P33400 DNL4YOR005C 2835 nt4.41□□□□□ -1.7
RIM101P33400 NAM7YMR080C 2916 nt4.41□□□□□ -1.7
RIM101P33400 YDR354C-AYDR354C-A 144 nt4.4□□□□□ -1.71
RIM101P33400 SNA2YDR525W-A 240 nt4.4□□□□□ -1.71
RIM101P33400 snR53snR53 91 nt4.4□□□□□ -1.71
RIM101P33400 TTI1YKL033W 3117 nt4.4□□□□□ -1.71
RIM101P33400 ZRG8YER033C 3231 nt4.4□□□□□ -1.71
RIM101P33400 GCR1YPL075W 2358 nt4.39□□□□□ -1.71
RIM101P33400 YME2YMR302C 2553 nt4.38□□□□□ -1.71
RIM101P33400 SRO77YBL106C 3033 nt4.38□□□□□ -1.71
RIM101P33400 YLR035C-AYLR035C-A 3468 nt4.38□□□□□ -1.71
RIM101P33400 YDR186CYDR186C 2634 nt4.38□□□□□ -1.71
RIM101P33400 TCB3YML072C 4638 nt4.37□□□□□ -1.71
RIM101P33400 SAS3YBL052C 2496 nt4.37□□□□□ -1.71
RIM101P33400 AFI1YOR129C 2682 nt4.37□□□□□ -1.71
RIM101P33400 HMI1YOL095C 2121 nt4.37□□□□□ -1.71
RIM101P33400 MAD1YGL086W 2250 nt4.37□□□□□ -1.71
RIM101P33400 SKP2YNL311C 2292 nt4.36□□□□□ -1.71
RIM101P33400 STB4YMR019W 2850 nt4.35□□□□□ -1.71
RIM101P33400 PAU8YAL068C 363 nt4.35□□□□□ -1.71
RIM101P33400 PAU18YLL064C 363 nt4.35□□□□□ -1.71
RIM101P33400 PDR8YLR266C 2106 nt4.35□□□□□ -1.71
RIM101P33400 PAU6YNR076W 363 nt4.35□□□□□ -1.71
RIM101P33400 PAU20YOL161C 363 nt4.35□□□□□ -1.71
RIM101P33400 CRS5YOR031W 210 nt4.35□□□□□ -1.71
RIM101P33400 NET1YJL076W 3570 nt4.35□□□□□ -1.71
RIM101P33400 YPR170W-BYPR170W-B 258 nt4.34□□□□□ -1.71
RIM101P33400 snR39BsnR39B 96 nt4.34□□□□□ -1.71
RIM101P33400 REC8YPR007C 2043 nt4.34□□□□□ -1.71
RIM101P33400 MTR4YJL050W 3222 nt4.34□□□□□ -1.72
RIM101P33400 YHR080CYHR080C 4038 nt4.33□□□□□ -1.72
RIM101P33400 YLR364C-AYLR364C-A 123 nt4.33□□□□□ -1.72
RIM101P33400 YOL083C-AYOL083C-A 141 nt4.33□□□□□ -1.72
RIM101P33400 IFH1YLR223C 3258 nt4.33□□□□□ -1.72
RIM101P33400 TFC1YBR123C 1950 nt4.33□□□□□ -1.72
RIM101P33400 CAT2YML042W 2013 nt4.32□□□□□ -1.72
RIM101P33400 DGR2YKL121W 2559 nt4.32□□□□□ -1.72
RIM101P33400 MET5YJR137C 4329 nt4.32□□□□□ -1.72
RIM101P33400 RPO21YDL140C 5202 nt4.31□□□□□ -1.72
RIM101P33400 DUG2YBR281C 2637 nt4.31□□□□□ -1.72
RIM101P33400 SWH1YAR042W 3567 nt4.31□□□□□ -1.72
RIM101P33400 STB6YKL072W 2301 nt4.31□□□□□ -1.72
RIM101P33400 COX5BYIL111W 456 nt4.31□□□□□ -1.72
RIM101P33400 YJL026C-AYJL026C-A 222 nt4.31□□□□□ -1.72
RIM101P33400 SYT1YPR095C 3681 nt4.3□□□□□ -1.72
RIM101P33400 YIL156W-BYIL156W-B 222 nt4.3□□□□□ -1.72
RIM101P33400 YLL020CYLL020C 306 nt4.3□□□□□ -1.72
RIM101P33400 KTI11YBL071W-A 249 nt4.3□□□□□ -1.72
RIM101P33400 RTC1YOL138C 4026 nt4.3□□□□□ -1.72
RIM101P33400 TSC11YER093C 4293 nt4.29□□□□□ -1.72
RIM101P33400 ANB1YJR047C 474 nt4.29□□□□□ -1.72
RIM101P33400 YNR065CYNR065C 3351 nt4.29□□□□□ -1.72
RIM101P33400 SAP4YGL229C 2457 nt4.28□□□□□ -1.72
RIM101P33400 COA3YJL062W-A 258 nt4.28□□□□□ -1.72
RIM101P33400 RPL14AYKL006W 417 nt4.28□□□□□ -1.72
RIM101P33400 LHS1YKL073W 2646 nt4.28□□□□□ -1.72
RIM101P33400 SPO22YIL073C 2928 nt4.28□□□□□ -1.72
RIM101P33400 YPP1YGR198W 2454 nt4.27□□□□□ -1.73
RIM101P33400 YBL100W-CYBL100W-C 120 nt4.27□□□□□ -1.73
RIM101P33400 YBR072C-AYBR072C-A 162 nt4.27□□□□□ -1.73
RIM101P33400 ACB1YGR037C 264 nt4.26□□□□□ -1.73
RIM101P33400 NCR1YPL006W 3513 nt4.26□□□□□ -1.73
RIM101P33400 YCR102W-AYCR102W-A 198 nt4.25□□□□□ -1.73
RIM101P33400 SAP190YKR028W 3102 nt4.24□□□□□ -1.73
RIM101P33400 APL1YJR005W 2103 nt4.24□□□□□ -1.73
RIM101P33400 YMR317WYMR317W 3423 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms