Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 HSC82YMR186W 2118 nt2.42□□□□□ -2.02
PRP28P23394 YDR186CYDR186C 2634 nt2.42□□□□□ -2.02
PRP28P23394 SNC1YAL030W 354 nt2.42□□□□□ -2.02
PRP28P23394 YML007C-AYML007C-A 111 nt2.42□□□□□ -2.02
PRP28P23394 YMR141W-AYMR141W-A 225 nt2.42□□□□□ -2.02
PRP28P23394 YOR333CYOR333C 417 nt2.42□□□□□ -2.02
PRP28P23394 SEF1YBL066C 3447 nt2.42□□□□□ -2.02
PRP28P23394 SPO22YIL073C 2928 nt2.42□□□□□ -2.02
PRP28P23394 YPL150WYPL150W 2706 nt2.41□□□□□ -2.02
PRP28P23394 IRA2YOL081W 9240 nt2.41□□□□□ -2.02
PRP28P23394 NUP100YKL068W 2880 nt2.41□□□□□ -2.02
PRP28P23394 NOP53YPL146C 1368 nt2.41□□□□□ -2.02
PRP28P23394 YMR307C-AYMR307C-A 195 nt2.41□□□□□ -2.02
PRP28P23394 IES4YOR189W 351 nt2.41□□□□□ -2.02
PRP28P23394 YLR149CYLR149C 2193 nt2.41□□□□□ -2.02
PRP28P23394 VMR1YHL035C 4779 nt2.41□□□□□ -2.02
PRP28P23394 STB4YMR019W 2850 nt2.41□□□□□ -2.02
PRP28P23394 MVP1YMR004W 1536 nt2.41□□□□□ -2.02
PRP28P23394 YBR184WYBR184W 1572 nt2.4□□□□□ -2.02
PRP28P23394 YDR426CYDR426C 378 nt2.4□□□□□ -2.03
PRP28P23394 PCC1YKR095W-A 267 nt2.4□□□□□ -2.03
PRP28P23394 YLR294CYLR294C 330 nt2.4□□□□□ -2.03
PRP28P23394 RPS12YOR369C 432 nt2.4□□□□□ -2.03
PRP28P23394 YEL043WYEL043W 2871 nt2.4□□□□□ -2.03
PRP28P23394 PEP3YLR148W 2757 nt2.4□□□□□ -2.03
PRP28P23394 YGR250CYGR250C 2346 nt2.4□□□□□ -2.03
PRP28P23394 NPR2YEL062W 1848 nt2.4□□□□□ -2.03
PRP28P23394 AFI1YOR129C 2682 nt2.39□□□□□ -2.03
PRP28P23394 tC(GCA)BtC(GCA)B 72 nt2.39□□□□□ -2.03
PRP28P23394 tC(GCA)GtC(GCA)G 72 nt2.39□□□□□ -2.03
PRP28P23394 tC(GCA)P1tC(GCA)P1 72 nt2.39□□□□□ -2.03
PRP28P23394 tC(GCA)P2tC(GCA)P2 72 nt2.39□□□□□ -2.03
PRP28P23394 APQ12YIL040W 417 nt2.39□□□□□ -2.03
PRP28P23394 EMC6YLL014W 327 nt2.39□□□□□ -2.03
PRP28P23394 VPS34YLR240W 2628 nt2.39□□□□□ -2.03
PRP28P23394 CDC27YBL084C 2277 nt2.39□□□□□ -2.03
PRP28P23394 RIC1YLR039C 3171 nt2.39□□□□□ -2.03
PRP28P23394 FKS3YMR306W 5358 nt2.38□□□□□ -2.03
PRP28P23394 MMS22YLR320W 4365 nt2.38□□□□□ -2.03
PRP28P23394 RRP6YOR001W 2202 nt2.38□□□□□ -2.03
PRP28P23394 MDM20YOL076W 2391 nt2.38□□□□□ -2.03
PRP28P23394 PAM16YJL104W 450 nt2.38□□□□□ -2.03
PRP28P23394 PAU8YAL068C 363 nt2.38□□□□□ -2.03
PRP28P23394 YLR255CYLR255C 354 nt2.38□□□□□ -2.03
PRP28P23394 PAU20YOL161C 363 nt2.38□□□□□ -2.03
PRP28P23394 VPH1YOR270C 2523 nt2.38□□□□□ -2.03
PRP28P23394 SCW11YGL028C 1629 nt2.38□□□□□ -2.03
PRP28P23394 SMY1YKL079W 1971 nt2.38□□□□□ -2.03
PRP28P23394 EFR3YMR212C 2349 nt2.37□□□□□ -2.03
PRP28P23394 GRR1YJR090C 3456 nt2.37□□□□□ -2.03
PRP28P23394 CYB5YNL111C 363 nt2.37□□□□□ -2.03
PRP28P23394 KAP123YER110C 3342 nt2.37□□□□□ -2.03
PRP28P23394 MLH1YMR167W 2310 nt2.37□□□□□ -2.03
PRP28P23394 TUS1YLR425W 3924 nt2.36□□□□□ -2.03
PRP28P23394 YPR097WYPR097W 3222 nt2.36□□□□□ -2.03
PRP28P23394 PXA2YKL188C 2562 nt2.36□□□□□ -2.03
PRP28P23394 snR55snR55 98 nt2.36□□□□□ -2.03
PRP28P23394 RPL42BYHR141C 321 nt2.36□□□□□ -2.03
PRP28P23394 MBB1YJL199C 327 nt2.36□□□□□ -2.03
PRP28P23394 RPL42AYNL162W 321 nt2.36□□□□□ -2.03
PRP28P23394 YOL019W-AYOL019W-A 153 nt2.36□□□□□ -2.03
PRP28P23394 YOR394C-AYOR394C-A 168 nt2.36□□□□□ -2.03
PRP28P23394 YPR002C-AYPR002C-A 198 nt2.36□□□□□ -2.03
PRP28P23394 YCL023CYCL023C 348 nt2.36□□□□□ -2.03
PRP28P23394 SNF5YBR289W 2718 nt2.36□□□□□ -2.03
PRP28P23394 YKL165C-AYKL165C-A 234 nt2.35□□□□□ -2.03
PRP28P23394 YBL083CYBL083C 426 nt2.35□□□□□ -2.03
PRP28P23394 CRM1YGR218W 3255 nt2.35□□□□□ -2.03
PRP28P23394 GIS1YDR096W 2685 nt2.35□□□□□ -2.03
PRP28P23394 SSQ1YLR369W 1974 nt2.34□□□□□ -2.03
PRP28P23394 CFT2YLR115W 2580 nt2.34□□□□□ -2.03
PRP28P23394 PFD1YJL179W 330 nt2.34□□□□□ -2.03
PRP28P23394 YMR172C-AYMR172C-A 384 nt2.34□□□□□ -2.03
PRP28P23394 SCH9YHR205W 2475 nt2.34□□□□□ -2.04
PRP28P23394 SPF1YEL031W 3648 nt2.34□□□□□ -2.04
PRP28P23394 RAV1YJR033C 4074 nt2.33□□□□□ -2.04
PRP28P23394 ARP8YOR141C 2646 nt2.33□□□□□ -2.04
PRP28P23394 SSS1YDR086C 243 nt2.33□□□□□ -2.04
PRP28P23394 YHR180W-AYHR180W-A 183 nt2.33□□□□□ -2.04
PRP28P23394 YJL135WYJL135W 318 nt2.33□□□□□ -2.04
PRP28P23394 YJL197C-AYJL197C-A 282 nt2.33□□□□□ -2.04
PRP28P23394 TRX1YLR043C 312 nt2.33□□□□□ -2.04
PRP28P23394 YLR146W-AYLR146W-A 189 nt2.33□□□□□ -2.04
PRP28P23394 RPS17AYML024W 411 nt2.33□□□□□ -2.04
PRP28P23394 YNL114CYNL114C 372 nt2.33□□□□□ -2.04
PRP28P23394 YOR015WYOR015W 360 nt2.33□□□□□ -2.04
PRP28P23394 YOR302WYOR302W 78 nt2.33□□□□□ -2.04
PRP28P23394 MNL2YLR057W 2550 nt2.32□□□□□ -2.04
PRP28P23394 TOF1YNL273W 3717 nt2.32□□□□□ -2.04
PRP28P23394 PAU2YEL049W 363 nt2.32□□□□□ -2.04
PRP28P23394 ISD11YER048W-A 285 nt2.32□□□□□ -2.04
PRP28P23394 YGL052WYGL052W 306 nt2.32□□□□□ -2.04
PRP28P23394 YLR154W-AYLR154W-A 186 nt2.32□□□□□ -2.04
PRP28P23394 COS111YBR203W 2775 nt2.31□□□□□ -2.04
PRP28P23394 CSF1YLR087C 8877 nt2.31□□□□□ -2.04
PRP28P23394 GPG1YGL121C 381 nt2.31□□□□□ -2.04
PRP28P23394 YNL028WYNL028W 318 nt2.31□□□□□ -2.04
PRP28P23394 CSE2YNR010W 450 nt2.31□□□□□ -2.04
PRP28P23394 MGM1YOR211C 2646 nt2.31□□□□□ -2.04
PRP28P23394 RSE1YML049C 4086 nt2.31□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 45.3 ms