Protein–RNA interactions for Protein: P22516

CHL1, ATP-dependent DNA helicase CHL1, yeastyeast

Predicted RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL1P22516 LRG1YDL240W 3054 nt3.76□□□□□ -1.81
CHL1P22516 SCH9YHR205W 2475 nt3.76□□□□□ -1.81
CHL1P22516 MAD1YGL086W 2250 nt3.75□□□□□ -1.81
CHL1P22516 TFC1YBR123C 1950 nt3.75□□□□□ -1.81
CHL1P22516 MSH2YOL090W 2895 nt3.75□□□□□ -1.81
CHL1P22516 COG6YNL041C 2520 nt3.75□□□□□ -1.81
CHL1P22516 SBE22YHR103W 2559 nt3.74□□□□□ -1.81
CHL1P22516 RPL23BYER117W 414 nt3.74□□□□□ -1.81
CHL1P22516 snR47snR47 99 nt3.74□□□□□ -1.81
CHL1P22516 SWI1YPL016W 3945 nt3.74□□□□□ -1.81
CHL1P22516 ZDS1YMR273C 2748 nt3.73□□□□□ -1.81
CHL1P22516 YAT2YER024W 2772 nt3.72□□□□□ -1.81
CHL1P22516 YIL002W-AYIL002W-A 210 nt3.72□□□□□ -1.81
CHL1P22516 YNL114CYNL114C 372 nt3.72□□□□□ -1.81
CHL1P22516 RPN2YIL075C 2838 nt3.72□□□□□ -1.81
CHL1P22516 NCR1YPL006W 3513 nt3.71□□□□□ -1.81
CHL1P22516 YDL206WYDL206W 2289 nt3.71□□□□□ -1.82
CHL1P22516 EMC1YCL045C 2283 nt3.71□□□□□ -1.82
CHL1P22516 YFR016CYFR016C 3702 nt3.7□□□□□ -1.82
CHL1P22516 SWI6YLR182W 2412 nt3.7□□□□□ -1.82
CHL1P22516 BIR1YJR089W 2865 nt3.69□□□□□ -1.82
CHL1P22516 APL4YPR029C 2499 nt3.69□□□□□ -1.82
CHL1P22516 SEF1YBL066C 3447 nt3.69□□□□□ -1.82
CHL1P22516 YLR416CYLR416C 399 nt3.69□□□□□ -1.82
CHL1P22516 NOP9YJL010C 2001 nt3.69□□□□□ -1.82
CHL1P22516 SVL3YPL032C 2478 nt3.69□□□□□ -1.82
CHL1P22516 SET2YJL168C 2202 nt3.68□□□□□ -1.82
CHL1P22516 YDR089WYDR089W 2610 nt3.68□□□□□ -1.82
CHL1P22516 YLR154C-HYLR154C-H 132 nt3.68□□□□□ -1.82
CHL1P22516 YLR156C-AYLR156C-A 132 nt3.68□□□□□ -1.82
CHL1P22516 YLR157C-CYLR157C-C 132 nt3.68□□□□□ -1.82
CHL1P22516 YLR159C-AYLR159C-A 132 nt3.68□□□□□ -1.82
CHL1P22516 MPH1YIR002C 2982 nt3.68□□□□□ -1.82
CHL1P22516 NOG1YPL093W 1944 nt3.68□□□□□ -1.82
CHL1P22516 RPO31YOR116C 4383 nt3.67□□□□□ -1.82
CHL1P22516 VID27YNL212W 2349 nt3.67□□□□□ -1.82
CHL1P22516 RPB2YOR151C 3675 nt3.67□□□□□ -1.82
CHL1P22516 PWP2YCR057C 2772 nt3.67□□□□□ -1.82
CHL1P22516 RAD4YER162C 2265 nt3.67□□□□□ -1.82
CHL1P22516 21S_rRNA21S_rRNA 3296 nt3.66□□□□□ -1.82
CHL1P22516 RPH1YER169W 2391 nt3.66□□□□□ -1.82
CHL1P22516 FAP7YDL166C 594 nt3.66□□□□□ -1.82
CHL1P22516 MCM7YBR202W 2538 nt3.66□□□□□ -1.82
CHL1P22516 SPT16YGL207W 3108 nt3.65□□□□□ -1.82
CHL1P22516 VPS35YJL154C 2835 nt3.65□□□□□ -1.82
CHL1P22516 YGL140CYGL140C 3660 nt3.65□□□□□ -1.83
CHL1P22516 PUT3YKL015W 2940 nt3.65□□□□□ -1.83
CHL1P22516 YDR354C-AYDR354C-A 144 nt3.64□□□□□ -1.83
CHL1P22516 CIN1YOR349W 3045 nt3.63□□□□□ -1.83
CHL1P22516 MTC4YBR255W 2085 nt3.63□□□□□ -1.83
CHL1P22516 JEN1YKL217W 1851 nt3.63□□□□□ -1.83
CHL1P22516 YMR31YFR049W 372 nt3.63□□□□□ -1.83
CHL1P22516 YGL014C-AYGL014C-A 162 nt3.63□□□□□ -1.83
CHL1P22516 YOR108C-AYOR108C-A 210 nt3.63□□□□□ -1.83
CHL1P22516 RPS23BYPR132W 438 nt3.63□□□□□ -1.83
CHL1P22516 SAK1YER129W 3429 nt3.63□□□□□ -1.83
CHL1P22516 YDL025W-AYDL025W-A 105 nt3.62□□□□□ -1.83
CHL1P22516 CAF130YGR134W 3369 nt3.62□□□□□ -1.83
CHL1P22516 SKP2YNL311C 2292 nt3.61□□□□□ -1.83
CHL1P22516 RTT107YHR154W 3213 nt3.61□□□□□ -1.83
CHL1P22516 YLR352WYLR352W 2424 nt3.61□□□□□ -1.83
CHL1P22516 MAK10YEL053C 2202 nt3.61□□□□□ -1.83
CHL1P22516 RSM19YNR037C 276 nt3.61□□□□□ -1.83
CHL1P22516 RPS12YOR369C 432 nt3.61□□□□□ -1.83
CHL1P22516 LHS1YKL073W 2646 nt3.6□□□□□ -1.83
CHL1P22516 SWH1YAR042W 3567 nt3.6□□□□□ -1.83
CHL1P22516 YHR073W-AYHR073W-A 177 nt3.6□□□□□ -1.83
CHL1P22516 YLR286W-AYLR286W-A 135 nt3.6□□□□□ -1.83
CHL1P22516 YBL039C-AYBL039C-A 84 nt3.6□□□□□ -1.83
CHL1P22516 XRS2YDR369C 2565 nt3.6□□□□□ -1.83
CHL1P22516 KAP120YPL125W 3099 nt3.6□□□□□ -1.83
CHL1P22516 RDS1YCR106W 2499 nt3.6□□□□□ -1.83
CHL1P22516 SEC1YDR164C 2175 nt3.59□□□□□ -1.83
CHL1P22516 RRP6YOR001W 2202 nt3.59□□□□□ -1.83
CHL1P22516 EXO84YBR102C 2262 nt3.59□□□□□ -1.83
CHL1P22516 FLO10YKR102W 3510 nt3.59□□□□□ -1.83
CHL1P22516 SYT1YPR095C 3681 nt3.59□□□□□ -1.83
CHL1P22516 TTI1YKL033W 3117 nt3.59□□□□□ -1.83
CHL1P22516 YPR108W-AYPR108W-A 213 nt3.59□□□□□ -1.83
CHL1P22516 TIM12YBR091C 330 nt3.59□□□□□ -1.83
CHL1P22516 FAR1YJL157C 2493 nt3.59□□□□□ -1.84
CHL1P22516 RSF2YJR127C 4143 nt3.59□□□□□ -1.84
CHL1P22516 MMS4YBR098W 2076 nt3.58□□□□□ -1.84
CHL1P22516 YKU80YMR106C 1890 nt3.58□□□□□ -1.84
CHL1P22516 PHM6YDR281C 315 nt3.57□□□□□ -1.84
CHL1P22516 YLL020CYLL020C 306 nt3.57□□□□□ -1.84
CHL1P22516 SLA1YBL007C 3735 nt3.57□□□□□ -1.84
CHL1P22516 CCM1YGR150C 2595 nt3.57□□□□□ -1.84
CHL1P22516 UBP14YBR058C 2346 nt3.56□□□□□ -1.84
CHL1P22516 YCG1YDR325W 3108 nt3.56□□□□□ -1.84
CHL1P22516 YIL156W-BYIL156W-B 222 nt3.56□□□□□ -1.84
CHL1P22516 YJL026C-AYJL026C-A 222 nt3.56□□□□□ -1.84
CHL1P22516 RGM1YMR182C 636 nt3.56□□□□□ -1.84
CHL1P22516 ARO1YDR127W 4767 nt3.56□□□□□ -1.84
CHL1P22516 CRM1YGR218W 3255 nt3.56□□□□□ -1.84
CHL1P22516 BNI4YNL233W 2679 nt3.56□□□□□ -1.84
CHL1P22516 CHD1YER164W 4407 nt3.56□□□□□ -1.84
CHL1P22516 tM(CAU)Q2tM(CAU)Q2 78 nt3.55□□□□□ -1.84
CHL1P22516 PTP3YER075C 2787 nt3.54□□□□□ -1.84
CHL1P22516 ACB1YGR037C 264 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms