Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AL355075.4-201ENST00000554988 638 ntBASIC19.18■□□□□ 0.66
CCL4P13236 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCL4P13236 AL121829.2-201ENST00000620908 328 ntBASIC19.18■□□□□ 0.66
CCL4P13236 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL4P13236 AL024507.2-201ENST00000606070 2574 ntBASIC19.18■□□□□ 0.66
CCL4P13236 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL4P13236 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL4P13236 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL4P13236 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL4P13236 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCL4P13236 AL117328.2-201ENST00000624617 1940 ntBASIC19.17■□□□□ 0.66
CCL4P13236 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCL4P13236 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 MIR1224-201ENST00000408193 85 ntBASIC19.17■□□□□ 0.66
CCL4P13236 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.17■□□□□ 0.66
CCL4P13236 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.17■□□□□ 0.66
CCL4P13236 KRT18P21-201ENST00000515767 1272 ntBASIC19.17■□□□□ 0.66
CCL4P13236 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.17■□□□□ 0.66
CCL4P13236 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.17■□□□□ 0.66
CCL4P13236 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.17■□□□□ 0.66
CCL4P13236 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.17■□□□□ 0.66
CCL4P13236 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.17■□□□□ 0.66
CCL4P13236 AC133561.5-201ENST00000635547 218 ntBASIC19.17■□□□□ 0.66
CCL4P13236 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCL4P13236 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL4P13236 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.16■□□□□ 0.66
CCL4P13236 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 EP400NL-214ENST00000641289 2402 ntBASIC19.16■□□□□ 0.66
CCL4P13236 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL4P13236 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL4P13236 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL4P13236 AC087499.1-201ENST00000418141 1075 ntBASIC19.16■□□□□ 0.66
CCL4P13236 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.16■□□□□ 0.66
CCL4P13236 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.16■□□□□ 0.66
CCL4P13236 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL4P13236 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.16■□□□□ 0.66
CCL4P13236 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL4P13236 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
CCL4P13236 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCL4P13236 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCL4P13236 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCL4P13236 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.16■□□□□ 0.66
CCL4P13236 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.16■□□□□ 0.66
CCL4P13236 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL4P13236 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.15■□□□□ 0.66
CCL4P13236 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
CCL4P13236 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCL4P13236 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCL4P13236 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCL4P13236 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.15■□□□□ 0.66
CCL4P13236 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.15■□□□□ 0.66
CCL4P13236 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.15■□□□□ 0.66
CCL4P13236 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.15■□□□□ 0.66
CCL4P13236 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.15■□□□□ 0.66
CCL4P13236 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.15■□□□□ 0.66
CCL4P13236 HTR7P1-201ENST00000538670 1336 ntBASIC19.15■□□□□ 0.66
CCL4P13236 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL4P13236 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCL4P13236 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms