Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 NTF6G-201ENST00000591094 616 ntBASIC21.81■■□□□ 1.08
CCDC172P0C7W6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC172P0C7W6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 KRT18P11-201ENST00000435214 1283 ntBASIC21.8■■□□□ 1.08
CCDC172P0C7W6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC172P0C7W6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC172P0C7W6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 TERF1P5-201ENST00000477545 1207 ntBASIC21.78■■□□□ 1.08
CCDC172P0C7W6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 AL591742.1-201ENST00000604433 565 ntBASIC21.78■■□□□ 1.08
CCDC172P0C7W6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 AIRN-201ENST00000601203 4374 ntBASIC21.78■■□□□ 1.08
CCDC172P0C7W6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC172P0C7W6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 KRT18P61-201ENST00000585825 1298 ntBASIC21.77■■□□□ 1.08
CCDC172P0C7W6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC172P0C7W6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC172P0C7W6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC172P0C7W6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC172P0C7W6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC172P0C7W6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 AL162412.1-201ENST00000567129 965 ntBASIC21.76■■□□□ 1.07
CCDC172P0C7W6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC172P0C7W6 AC010536.3-201ENST00000620306 533 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms