Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD48P09326 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
CD48P09326 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.98■□□□□ 0.95
CD48P09326 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.98■□□□□ 0.95
CD48P09326 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 AL355472.2-201ENST00000422958 438 ntBASIC20.98■□□□□ 0.95
CD48P09326 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CD48P09326 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.98■□□□□ 0.95
CD48P09326 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.98■□□□□ 0.95
CD48P09326 AC073111.5-205ENST00000641717 521 ntBASIC20.98■□□□□ 0.95
CD48P09326 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.98■□□□□ 0.95
CD48P09326 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD48P09326 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.98■□□□□ 0.95
CD48P09326 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.98■□□□□ 0.95
CD48P09326 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CD48P09326 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CD48P09326 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.97■□□□□ 0.95
CD48P09326 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CD48P09326 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.97■□□□□ 0.95
CD48P09326 CDCA4P2-201ENST00000441182 718 ntBASIC20.97■□□□□ 0.95
CD48P09326 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.97■□□□□ 0.95
CD48P09326 AC093787.1-201ENST00000450396 207 ntBASIC20.97■□□□□ 0.95
CD48P09326 TCF3P1-201ENST00000423021 1937 ntBASIC20.97■□□□□ 0.95
CD48P09326 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD48P09326 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
CD48P09326 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
CD48P09326 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.96■□□□□ 0.95
CD48P09326 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CD48P09326 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.96■□□□□ 0.95
CD48P09326 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 MCRIP2P1-201ENST00000394346 511 ntBASIC20.96■□□□□ 0.95
CD48P09326 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.96■□□□□ 0.95
CD48P09326 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 AL137784.2-201ENST00000607332 1000 ntBASIC20.96■□□□□ 0.95
CD48P09326 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.96■□□□□ 0.95
CD48P09326 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CD48P09326 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.96■□□□□ 0.95
CD48P09326 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.96■□□□□ 0.95
CD48P09326 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CD48P09326 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CD48P09326 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.95■□□□□ 0.94
CD48P09326 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.95■□□□□ 0.94
CD48P09326 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.95■□□□□ 0.94
CD48P09326 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CD48P09326 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 PGM5P4-201ENST00000421970 445 ntBASIC20.95■□□□□ 0.94
CD48P09326 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.95■□□□□ 0.94
CD48P09326 AC005181.1-201ENST00000604782 1256 ntBASIC20.95■□□□□ 0.94
CD48P09326 AC100791.3-201ENST00000617619 330 ntBASIC20.95■□□□□ 0.94
CD48P09326 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.95■□□□□ 0.94
CD48P09326 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
CD48P09326 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD48P09326 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD48P09326 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
CD48P09326 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CD48P09326 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.94■□□□□ 0.94
CD48P09326 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.94■□□□□ 0.94
CD48P09326 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.94■□□□□ 0.94
CD48P09326 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CD48P09326 AC069236.1-201ENST00000604339 616 ntBASIC20.94■□□□□ 0.94
CD48P09326 AL050303.2-201ENST00000619798 666 ntBASIC20.94■□□□□ 0.94
CD48P09326 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD48P09326 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms