Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YPR117WYPR117W 7470 nt1.28□□□□□ -2.2
RAD3P06839 VAM6YDL077C 3150 nt1.28□□□□□ -2.21
RAD3P06839 SHE9YDR393W 1371 nt1.27□□□□□ -2.21
RAD3P06839 YDR169C-AYDR169C-A 150 nt1.27□□□□□ -2.21
RAD3P06839 SMB1YER029C 591 nt1.27□□□□□ -2.21
RAD3P06839 EMC4YGL231C 573 nt1.27□□□□□ -2.21
RAD3P06839 tV(UAC)BtV(UAC)B 74 nt1.27□□□□□ -2.21
RAD3P06839 tV(UAC)DtV(UAC)D 74 nt1.27□□□□□ -2.21
RAD3P06839 RPL34BYIL052C 366 nt1.27□□□□□ -2.21
RAD3P06839 SPC1YJR010C-A 285 nt1.27□□□□□ -2.21
RAD3P06839 HHT1YBR010W 411 nt1.27□□□□□ -2.21
RAD3P06839 RPL33BYOR234C 324 nt1.27□□□□□ -2.21
RAD3P06839 SVS1YPL163C 783 nt1.27□□□□□ -2.21
RAD3P06839 MSN5YDR335W 3675 nt1.27□□□□□ -2.21
RAD3P06839 YER135CYER135C 393 nt1.26□□□□□ -2.21
RAD3P06839 YHR139C-AYHR139C-A 312 nt1.26□□□□□ -2.21
RAD3P06839 EMC5YIL027C 426 nt1.26□□□□□ -2.21
RAD3P06839 YBL073WYBL073W 312 nt1.26□□□□□ -2.21
RAD3P06839 YPR146CYPR146C 330 nt1.26□□□□□ -2.21
RAD3P06839 YBR121C-AYBR121C-A 159 nt1.26□□□□□ -2.21
RAD3P06839 RSM22YKL155C 1887 nt1.26□□□□□ -2.21
RAD3P06839 MAK10YEL053C 2202 nt1.25□□□□□ -2.21
RAD3P06839 YBR184WYBR184W 1572 nt1.25□□□□□ -2.21
RAD3P06839 MSH5YDL154W 2706 nt1.25□□□□□ -2.21
RAD3P06839 HNT1YDL125C 477 nt1.25□□□□□ -2.21
RAD3P06839 QCR7YDR529C 384 nt1.25□□□□□ -2.21
RAD3P06839 FMP23YBR047W 528 nt1.25□□□□□ -2.21
RAD3P06839 SPO75YLL005C 2607 nt1.25□□□□□ -2.21
RAD3P06839 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
RAD3P06839 PIP2YOR363C 2991 nt1.24□□□□□ -2.21
RAD3P06839 DGR2YKL121W 2559 nt1.24□□□□□ -2.21
RAD3P06839 OSH6YKR003W 1347 nt1.24□□□□□ -2.21
RAD3P06839 PPN1YDR452W 2025 nt1.24□□□□□ -2.21
RAD3P06839 MTC7YEL033W 420 nt1.24□□□□□ -2.21
RAD3P06839 YGR265WYGR265W 411 nt1.24□□□□□ -2.21
RAD3P06839 YAP3YHL009C 993 nt1.24□□□□□ -2.21
RAD3P06839 CRG1YHR209W 876 nt1.24□□□□□ -2.21
RAD3P06839 YOR029WYOR029W 336 nt1.24□□□□□ -2.21
RAD3P06839 MVP1YMR004W 1536 nt1.24□□□□□ -2.21
RAD3P06839 DOP1YDR141C 5097 nt1.24□□□□□ -2.21
RAD3P06839 SCC2YDR180W 4482 nt1.23□□□□□ -2.21
RAD3P06839 HUR1YGL168W 333 nt1.23□□□□□ -2.21
RAD3P06839 YAL016C-BYAL016C-B 186 nt1.23□□□□□ -2.21
RAD3P06839 RRT15YLR162W-A 189 nt1.23□□□□□ -2.21
RAD3P06839 SLM6YBR266C 453 nt1.23□□□□□ -2.21
RAD3P06839 YCL046WYCL046W 324 nt1.23□□□□□ -2.21
RAD3P06839 IML1YJR138W 4755 nt1.23□□□□□ -2.21
RAD3P06839 AZF1YOR113W 2745 nt1.22□□□□□ -2.21
RAD3P06839 RPL9AYGL147C 576 nt1.22□□□□□ -2.21
RAD3P06839 DDR48YMR173W 1293 nt1.22□□□□□ -2.21
RAD3P06839 GPI15YNL038W 690 nt1.22□□□□□ -2.21
RAD3P06839 NOP15YNL110C 663 nt1.22□□□□□ -2.21
RAD3P06839 YOR248WYOR248W 303 nt1.22□□□□□ -2.21
RAD3P06839 YPR039WYPR039W 336 nt1.22□□□□□ -2.21
RAD3P06839 NUP145YGL092W 3954 nt1.22□□□□□ -2.21
RAD3P06839 SEF1YBL066C 3447 nt1.22□□□□□ -2.21
RAD3P06839 MET32YDR253C 576 nt1.21□□□□□ -2.22
RAD3P06839 APQ13YJL075C 417 nt1.21□□□□□ -2.22
RAD3P06839 PAU18YLL064C 363 nt1.21□□□□□ -2.22
RAD3P06839 PAU6YNR076W 363 nt1.21□□□□□ -2.22
RAD3P06839 APL1YJR005W 2103 nt1.21□□□□□ -2.22
RAD3P06839 SPR3YGR059W 1539 nt1.2□□□□□ -2.22
RAD3P06839 UFD2YDL190C 2886 nt1.2□□□□□ -2.22
RAD3P06839 YDL152WYDL152W 366 nt1.2□□□□□ -2.22
RAD3P06839 YHR028W-AYHR028W-A 321 nt1.2□□□□□ -2.22
RAD3P06839 RPL42BYHR141C 321 nt1.2□□□□□ -2.22
RAD3P06839 RPL42AYNL162W 321 nt1.2□□□□□ -2.22
RAD3P06839 YOR376WYOR376W 369 nt1.2□□□□□ -2.22
RAD3P06839 NST1YNL091W 3723 nt1.19□□□□□ -2.22
RAD3P06839 YEL050W-AYEL050W-A 192 nt1.19□□□□□ -2.22
RAD3P06839 YER084W-AYER084W-A 513 nt1.19□□□□□ -2.22
RAD3P06839 YGR025WYGR025W 303 nt1.19□□□□□ -2.22
RAD3P06839 RPL40BYKR094C 387 nt1.19□□□□□ -2.22
RAD3P06839 FCF2YLR051C 654 nt1.19□□□□□ -2.22
RAD3P06839 YER023C-AYER023C-A 213 nt1.18□□□□□ -2.22
RAD3P06839 RPF1YHR088W 888 nt1.18□□□□□ -2.22
RAD3P06839 YNL114CYNL114C 372 nt1.18□□□□□ -2.22
RAD3P06839 snR13snR13 124 nt1.18□□□□□ -2.22
RAD3P06839 YBR071WYBR071W 636 nt1.18□□□□□ -2.22
RAD3P06839 YPR099CYPR099C 357 nt1.18□□□□□ -2.22
RAD3P06839 SIP4YJL089W 2490 nt1.18□□□□□ -2.22
RAD3P06839 TMA22YJR014W 597 nt1.17□□□□□ -2.22
RAD3P06839 RPS18BYML026C 441 nt1.17□□□□□ -2.22
RAD3P06839 HCH1YNL281W 462 nt1.17□□□□□ -2.22
RAD3P06839 YNL303WYNL303W 348 nt1.17□□□□□ -2.22
RAD3P06839 snR189snR189 189 nt1.17□□□□□ -2.22
RAD3P06839 BEM2YER155C 6504 nt1.16□□□□□ -2.22
RAD3P06839 YDR509WYDR509W 348 nt1.16□□□□□ -2.22
RAD3P06839 YEL030C-AYEL030C-A 315 nt1.16□□□□□ -2.22
RAD3P06839 MUK1YPL070W 1839 nt1.16□□□□□ -2.22
RAD3P06839 SEC5YDR166C 2916 nt1.15□□□□□ -2.23
RAD3P06839 YGR290WYGR290W 444 nt1.15□□□□□ -2.23
RAD3P06839 YHL009W-AYHL009W-A 1242 nt1.15□□□□□ -2.23
RAD3P06839 EAF6YJR082C 342 nt1.15□□□□□ -2.23
RAD3P06839 YLR269CYLR269C 351 nt1.15□□□□□ -2.23
RAD3P06839 YOR161W-BYOR161W-B 261 nt1.15□□□□□ -2.23
RAD3P06839 YPR063CYPR063C 423 nt1.15□□□□□ -2.23
RAD3P06839 PAN3YKL025C 2040 nt1.15□□□□□ -2.23
RAD3P06839 SRP14YDL092W 441 nt1.14□□□□□ -2.23
RAD3P06839 YDL211CYDL211C 1119 nt1.14□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms