Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.38■■□□□ 1.49
CHGBP05060 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.38■■□□□ 1.49
CHGBP05060 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.38■■□□□ 1.49
CHGBP05060 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHGBP05060 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.37■■□□□ 1.49
CHGBP05060 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
CHGBP05060 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.37■■□□□ 1.49
CHGBP05060 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 ABHD17AP1-201ENST00000358206 933 ntBASIC24.37■■□□□ 1.49
CHGBP05060 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 PGM5P4-201ENST00000421970 445 ntBASIC24.37■■□□□ 1.49
CHGBP05060 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.37■■□□□ 1.49
CHGBP05060 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.37■■□□□ 1.49
CHGBP05060 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.37■■□□□ 1.49
CHGBP05060 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 DPP3P2-201ENST00000416030 1696 ntBASIC24.37■■□□□ 1.49
CHGBP05060 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHGBP05060 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.36■■□□□ 1.49
CHGBP05060 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CHGBP05060 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.36■■□□□ 1.49
CHGBP05060 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.36■■□□□ 1.49
CHGBP05060 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.36■■□□□ 1.49
CHGBP05060 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 AC008403.3-201ENST00000598924 454 ntBASIC24.36■■□□□ 1.49
CHGBP05060 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.36■■□□□ 1.49
CHGBP05060 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.36■■□□□ 1.49
CHGBP05060 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHGBP05060 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.36■■□□□ 1.49
CHGBP05060 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CHGBP05060 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.35■■□□□ 1.49
CHGBP05060 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 AC020907.5-201ENST00000624372 1936 ntBASIC24.35■■□□□ 1.49
CHGBP05060 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHGBP05060 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.35■■□□□ 1.49
CHGBP05060 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
CHGBP05060 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CHGBP05060 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.34■■□□□ 1.49
CHGBP05060 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.34■■□□□ 1.49
CHGBP05060 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHGBP05060 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHGBP05060 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHGBP05060 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
CHGBP05060 PNMA6B-201ENST00000538162 1200 ntBASIC24.34■■□□□ 1.49
CHGBP05060 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
CHGBP05060 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.34■■□□□ 1.49
CHGBP05060 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHGBP05060 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.34■■□□□ 1.49
CHGBP05060 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHGBP05060 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHGBP05060 AC092720.2-201ENST00000602388 1665 ntBASIC24.34■■□□□ 1.49
CHGBP05060 AC092368.3-202ENST00000574180 1591 ntBASIC24.33■■□□□ 1.49
CHGBP05060 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.33■■□□□ 1.49
CHGBP05060 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.33■■□□□ 1.49
CHGBP05060 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.33■■□□□ 1.49
CHGBP05060 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.33■■□□□ 1.49
CHGBP05060 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.33■■□□□ 1.49
CHGBP05060 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHGBP05060 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.33■■□□□ 1.49
CHGBP05060 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.33■■□□□ 1.49
CHGBP05060 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms