Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
P04436 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.49■□□□□ 0.55
P04436 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.49■□□□□ 0.55
P04436 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
P04436 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
P04436 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 FP700111.2-201ENST00000619190 1892 ntBASIC18.49■□□□□ 0.55
P04436 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.49■□□□□ 0.55
P04436 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P04436 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
P04436 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
P04436 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 AC128676.1-201ENST00000454392 318 ntBASIC18.48■□□□□ 0.55
P04436 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.48■□□□□ 0.55
P04436 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.48■□□□□ 0.55
P04436 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.48■□□□□ 0.55
P04436 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.48■□□□□ 0.55
P04436 AC005829.2-201ENST00000571422 1056 ntBASIC18.48■□□□□ 0.55
P04436 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P04436 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.48■□□□□ 0.55
P04436 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
P04436 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
P04436 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 AC005229.4-201ENST00000610085 2198 ntBASIC18.47■□□□□ 0.55
P04436 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.47■□□□□ 0.55
P04436 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
P04436 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.47■□□□□ 0.55
P04436 AC008403.3-201ENST00000598924 454 ntBASIC18.47■□□□□ 0.55
P04436 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.47■□□□□ 0.55
P04436 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.47■□□□□ 0.55
P04436 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
P04436 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
P04436 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
P04436 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
P04436 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
P04436 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.46■□□□□ 0.55
P04436 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.46■□□□□ 0.55
P04436 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.46■□□□□ 0.55
P04436 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
P04436 AC008687.6-201ENST00000596318 630 ntBASIC18.46■□□□□ 0.55
P04436 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.46■□□□□ 0.55
P04436 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.46■□□□□ 0.55
P04436 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
P04436 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P04436 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
P04436 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
P04436 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 PRORSD1P-201ENST00000295112 541 ntBASIC18.45■□□□□ 0.54
P04436 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.45■□□□□ 0.54
P04436 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.45■□□□□ 0.54
P04436 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.45■□□□□ 0.54
P04436 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.45■□□□□ 0.54
P04436 AC006557.6-201ENST00000623071 864 ntBASIC18.45■□□□□ 0.54
P04436 AC073648.6-201ENST00000641589 218 ntBASIC18.45■□□□□ 0.54
P04436 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.45■□□□□ 0.54
P04436 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
P04436 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
P04436 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.45■□□□□ 0.54
P04436 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
P04436 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
P04436 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms