Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.66■□□□□ 0.58
LGI1O95970 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.66■□□□□ 0.58
LGI1O95970 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LGI1O95970 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LGI1O95970 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LGI1O95970 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.66■□□□□ 0.58
LGI1O95970 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.66■□□□□ 0.58
LGI1O95970 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.66■□□□□ 0.58
LGI1O95970 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.66■□□□□ 0.58
LGI1O95970 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.66■□□□□ 0.58
LGI1O95970 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LGI1O95970 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.65■□□□□ 0.58
LGI1O95970 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.65■□□□□ 0.58
LGI1O95970 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LGI1O95970 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.65■□□□□ 0.58
LGI1O95970 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.65■□□□□ 0.58
LGI1O95970 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.65■□□□□ 0.58
LGI1O95970 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LGI1O95970 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGI1O95970 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LGI1O95970 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LGI1O95970 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LGI1O95970 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.64■□□□□ 0.57
LGI1O95970 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.64■□□□□ 0.57
LGI1O95970 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LGI1O95970 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.64■□□□□ 0.57
LGI1O95970 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.64■□□□□ 0.57
LGI1O95970 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.64■□□□□ 0.57
LGI1O95970 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.64■□□□□ 0.57
LGI1O95970 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
LGI1O95970 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.64■□□□□ 0.57
LGI1O95970 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.64■□□□□ 0.57
LGI1O95970 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGI1O95970 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.63■□□□□ 0.57
LGI1O95970 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.63■□□□□ 0.57
LGI1O95970 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.63■□□□□ 0.57
LGI1O95970 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LGI1O95970 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGI1O95970 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.63■□□□□ 0.57
LGI1O95970 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGI1O95970 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGI1O95970 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms