Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.93■□□□□ 0.3
ABCA1O95477 AL353708.3-201ENST00000610272 989 ntBASIC16.93■□□□□ 0.3
ABCA1O95477 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 AC087633.2-202ENST00000565166 1439 ntBASIC16.93■□□□□ 0.3
ABCA1O95477 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ABCA1O95477 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ABCA1O95477 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ABCA1O95477 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.93■□□□□ 0.3
ABCA1O95477 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.92■□□□□ 0.3
ABCA1O95477 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.92■□□□□ 0.3
ABCA1O95477 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.92■□□□□ 0.3
ABCA1O95477 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.92■□□□□ 0.3
ABCA1O95477 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.92■□□□□ 0.3
ABCA1O95477 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.92■□□□□ 0.3
ABCA1O95477 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.92■□□□□ 0.3
ABCA1O95477 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.92■□□□□ 0.3
ABCA1O95477 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ABCA1O95477 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.91■□□□□ 0.3
ABCA1O95477 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.91■□□□□ 0.3
ABCA1O95477 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.91■□□□□ 0.3
ABCA1O95477 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.91■□□□□ 0.3
ABCA1O95477 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ABCA1O95477 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.91■□□□□ 0.3
ABCA1O95477 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.91■□□□□ 0.3
ABCA1O95477 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.91■□□□□ 0.3
ABCA1O95477 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.91■□□□□ 0.3
ABCA1O95477 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ABCA1O95477 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ABCA1O95477 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.91■□□□□ 0.3
ABCA1O95477 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
ABCA1O95477 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.91■□□□□ 0.3
ABCA1O95477 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ABCA1O95477 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ABCA1O95477 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCA1O95477 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCA1O95477 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCA1O95477 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCA1O95477 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ABCA1O95477 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ABCA1O95477 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.9■□□□□ 0.3
ABCA1O95477 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCA1O95477 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.9■□□□□ 0.3
ABCA1O95477 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.9■□□□□ 0.3
ABCA1O95477 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.9■□□□□ 0.3
ABCA1O95477 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.9■□□□□ 0.3
ABCA1O95477 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ABCA1O95477 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ABCA1O95477 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.9■□□□□ 0.3
ABCA1O95477 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ABCA1O95477 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms