Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCNT1O60563 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23■■□□□ 1.27
CCNT1O60563 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.99■■□□□ 1.27
CCNT1O60563 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.99■■□□□ 1.27
CCNT1O60563 AC091874.3-201ENST00000512672 1195 ntBASIC22.99■■□□□ 1.27
CCNT1O60563 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.99■■□□□ 1.27
CCNT1O60563 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.99■■□□□ 1.27
CCNT1O60563 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.99■■□□□ 1.27
CCNT1O60563 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.99■■□□□ 1.27
CCNT1O60563 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CCNT1O60563 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.99■■□□□ 1.27
CCNT1O60563 DPP3P2-201ENST00000416030 1696 ntBASIC22.99■■□□□ 1.27
CCNT1O60563 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.99■■□□□ 1.27
CCNT1O60563 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CCNT1O60563 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCNT1O60563 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCNT1O60563 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.98■■□□□ 1.27
CCNT1O60563 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCNT1O60563 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCNT1O60563 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCNT1O60563 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CCNT1O60563 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.98■■□□□ 1.27
CCNT1O60563 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCNT1O60563 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCNT1O60563 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCNT1O60563 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CCNT1O60563 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.98■■□□□ 1.27
CCNT1O60563 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.97■■□□□ 1.27
CCNT1O60563 SMG8-203ENST00000578922 2178 ntBASIC22.97■■□□□ 1.27
CCNT1O60563 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.97■■□□□ 1.27
CCNT1O60563 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CCNT1O60563 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.97■■□□□ 1.27
CCNT1O60563 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.97■■□□□ 1.27
CCNT1O60563 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCNT1O60563 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CCNT1O60563 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CCNT1O60563 AC069152.1-201ENST00000438030 544 ntBASIC22.97■■□□□ 1.27
CCNT1O60563 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCNT1O60563 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCNT1O60563 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.97■■□□□ 1.27
CCNT1O60563 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.97■■□□□ 1.27
CCNT1O60563 AC133041.1-202ENST00000642053 222 ntBASIC22.97■■□□□ 1.27
CCNT1O60563 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCNT1O60563 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CCNT1O60563 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
CCNT1O60563 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.96■■□□□ 1.27
CCNT1O60563 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.96■■□□□ 1.27
CCNT1O60563 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.96■■□□□ 1.27
CCNT1O60563 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CCNT1O60563 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CCNT1O60563 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CCNT1O60563 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 AL512408.1-201ENST00000569378 2000 ntBASIC22.96■■□□□ 1.27
CCNT1O60563 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCNT1O60563 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CCNT1O60563 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.95■■□□□ 1.26
CCNT1O60563 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CCNT1O60563 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 AC073210.2-201ENST00000430369 194 ntBASIC22.95■■□□□ 1.26
CCNT1O60563 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.95■■□□□ 1.26
CCNT1O60563 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.95■■□□□ 1.26
CCNT1O60563 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.95■■□□□ 1.26
CCNT1O60563 AC097658.1-201ENST00000475555 843 ntBASIC22.95■■□□□ 1.26
CCNT1O60563 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.95■■□□□ 1.26
CCNT1O60563 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.95■■□□□ 1.26
CCNT1O60563 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CCNT1O60563 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.95■■□□□ 1.26
CCNT1O60563 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 MYC-209ENST00000641252 345 ntBASIC22.95■■□□□ 1.26
CCNT1O60563 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCNT1O60563 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.94■■□□□ 1.26
CCNT1O60563 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.94■■□□□ 1.26
CCNT1O60563 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.94■■□□□ 1.26
CCNT1O60563 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms