Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE3O43900 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.43■□□□□ 0.7
PRICKLE3O43900 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.43■□□□□ 0.7
PRICKLE3O43900 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE3O43900 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 AC023632.3-201ENST00000521633 145 ntBASIC19.42■□□□□ 0.7
PRICKLE3O43900 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRICKLE3O43900 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE3O43900 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.41■□□□□ 0.7
PRICKLE3O43900 RNA5SP413-201ENST00000516373 109 ntBASIC19.41■□□□□ 0.7
PRICKLE3O43900 CD99P1-205ENST00000527459 561 ntBASIC19.41■□□□□ 0.7
PRICKLE3O43900 PNMA6B-201ENST00000538162 1200 ntBASIC19.41■□□□□ 0.7
PRICKLE3O43900 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRICKLE3O43900 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE3O43900 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
PRICKLE3O43900 DPP3P2-201ENST00000416030 1696 ntBASIC19.4■□□□□ 0.7
PRICKLE3O43900 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE3O43900 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 GABARAPL3-202ENST00000624044 1851 ntBASIC19.4■□□□□ 0.7
PRICKLE3O43900 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE3O43900 UNC93B5-201ENST00000530315 699 ntBASIC19.4■□□□□ 0.7
PRICKLE3O43900 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.4■□□□□ 0.7
PRICKLE3O43900 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.4■□□□□ 0.7
PRICKLE3O43900 TMEM191A-211ENST00000637163 1067 ntBASIC19.4■□□□□ 0.7
PRICKLE3O43900 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE3O43900 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRICKLE3O43900 AC092368.3-202ENST00000574180 1591 ntBASIC19.4■□□□□ 0.7
PRICKLE3O43900 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.4■□□□□ 0.7
PRICKLE3O43900 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRICKLE3O43900 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRICKLE3O43900 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 AC005829.2-201ENST00000571422 1056 ntBASIC19.39■□□□□ 0.69
PRICKLE3O43900 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRICKLE3O43900 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRICKLE3O43900 PKD1P6-201ENST00000343738 4769 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms