Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.4■□□□□ 0.38
PHF1O43189 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PHF1O43189 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
PHF1O43189 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.39■□□□□ 0.38
PHF1O43189 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.39■□□□□ 0.38
PHF1O43189 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.39■□□□□ 0.38
PHF1O43189 KRT16P2-201ENST00000414673 1423 ntBASIC17.39■□□□□ 0.38
PHF1O43189 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PHF1O43189 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.39■□□□□ 0.37
PHF1O43189 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.39■□□□□ 0.37
PHF1O43189 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.39■□□□□ 0.37
PHF1O43189 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.39■□□□□ 0.37
PHF1O43189 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PHF1O43189 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.39■□□□□ 0.37
PHF1O43189 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
PHF1O43189 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
PHF1O43189 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
PHF1O43189 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHF1O43189 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.38■□□□□ 0.37
PHF1O43189 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHF1O43189 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PHF1O43189 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.38■□□□□ 0.37
PHF1O43189 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PHF1O43189 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.38■□□□□ 0.37
PHF1O43189 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PHF1O43189 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.38■□□□□ 0.37
PHF1O43189 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.38■□□□□ 0.37
PHF1O43189 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PHF1O43189 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PHF1O43189 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PHF1O43189 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.38■□□□□ 0.37
PHF1O43189 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PHF1O43189 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PHF1O43189 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PHF1O43189 AC138932.1-201ENST00000534164 6830 ntBASIC17.37■□□□□ 0.37
PHF1O43189 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.37■□□□□ 0.37
PHF1O43189 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.37■□□□□ 0.37
PHF1O43189 ESRRAP1-201ENST00000400596 1257 ntBASIC17.37■□□□□ 0.37
PHF1O43189 MIPEPP3-201ENST00000412105 444 ntBASIC17.37■□□□□ 0.37
PHF1O43189 AC142381.4-202ENST00000563973 229 ntBASIC17.37■□□□□ 0.37
PHF1O43189 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.37■□□□□ 0.37
PHF1O43189 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.37■□□□□ 0.37
PHF1O43189 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHF1O43189 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.36■□□□□ 0.37
PHF1O43189 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.36■□□□□ 0.37
PHF1O43189 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PHF1O43189 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms