Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CGB1A6NKQ9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 AC010536.3-201ENST00000620306 533 ntBASIC16.15■□□□□ 0.18
CGB1A6NKQ9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CGB1A6NKQ9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CGB1A6NKQ9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 TERF1P5-201ENST00000477545 1207 ntBASIC16.14■□□□□ 0.17
CGB1A6NKQ9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.14■□□□□ 0.17
CGB1A6NKQ9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 TCF3P1-201ENST00000423021 1937 ntBASIC16.13■□□□□ 0.17
CGB1A6NKQ9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 KRT18P5-201ENST00000436075 1291 ntBASIC16.13■□□□□ 0.17
CGB1A6NKQ9 CDV3P1-201ENST00000471403 739 ntBASIC16.13■□□□□ 0.17
CGB1A6NKQ9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.13■□□□□ 0.17
CGB1A6NKQ9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms