Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 MYC-209ENST00000641252 345 ntBASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM9A6NGZ8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM9A6NGZ8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 AC092720.2-201ENST00000602388 1665 ntBASIC14.61□□□□□ -0.07
SMIM9A6NGZ8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 HLA-B-256ENST00000639848 1089 ntBASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM9A6NGZ8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SMIM9A6NGZ8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM9A6NGZ8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM9A6NGZ8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM9A6NGZ8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM9A6NGZ8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms