Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.09■■■□□ 2.41
HFM1A2PYH4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
HFM1A2PYH4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
HFM1A2PYH4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC30.09■■■□□ 2.41
HFM1A2PYH4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC30.09■■■□□ 2.41
HFM1A2PYH4 AL031963.3-201ENST00000606441 850 ntBASIC30.09■■■□□ 2.41
HFM1A2PYH4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
HFM1A2PYH4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
HFM1A2PYH4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
HFM1A2PYH4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
HFM1A2PYH4 AL137060.1-201ENST00000618151 2648 ntBASIC30.08■■■□□ 2.41
HFM1A2PYH4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 ABHD17AP6-201ENST00000458502 1044 ntBASIC30.08■■■□□ 2.41
HFM1A2PYH4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
HFM1A2PYH4 AC006557.6-201ENST00000623071 864 ntBASIC30.08■■■□□ 2.41
HFM1A2PYH4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
HFM1A2PYH4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
HFM1A2PYH4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
HFM1A2PYH4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
HFM1A2PYH4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
HFM1A2PYH4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC30.07■■■□□ 2.4
HFM1A2PYH4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
HFM1A2PYH4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
HFM1A2PYH4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC30.06■■■□□ 2.4
HFM1A2PYH4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC30.06■■■□□ 2.4
HFM1A2PYH4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC30.06■■■□□ 2.4
HFM1A2PYH4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC30.06■■■□□ 2.4
HFM1A2PYH4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC30.06■■■□□ 2.4
HFM1A2PYH4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
HFM1A2PYH4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
HFM1A2PYH4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC30.05■■■□□ 2.4
HFM1A2PYH4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC30.05■■■□□ 2.4
HFM1A2PYH4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
HFM1A2PYH4 AC120498.8-201ENST00000614275 531 ntBASIC30.05■■■□□ 2.4
HFM1A2PYH4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
HFM1A2PYH4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC30.05■■■□□ 2.4
HFM1A2PYH4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.05■■■□□ 2.4
HFM1A2PYH4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC30.05■■■□□ 2.4
HFM1A2PYH4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
HFM1A2PYH4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
HFM1A2PYH4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC30.05■■■□□ 2.4
HFM1A2PYH4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC30.04■■■□□ 2.4
HFM1A2PYH4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
HFM1A2PYH4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
HFM1A2PYH4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HFM1A2PYH4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HFM1A2PYH4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.03■■■□□ 2.4
HFM1A2PYH4 AC092720.2-201ENST00000602388 1665 ntBASIC30.03■■■□□ 2.4
HFM1A2PYH4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
HFM1A2PYH4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.03■■■□□ 2.4
HFM1A2PYH4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
HFM1A2PYH4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC30.03■■■□□ 2.4
HFM1A2PYH4 MTDHP1-201ENST00000605323 784 ntBASIC30.03■■■□□ 2.4
HFM1A2PYH4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HFM1A2PYH4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC30.02■■■□□ 2.4
HFM1A2PYH4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
HFM1A2PYH4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
HFM1A2PYH4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
HFM1A2PYH4 DPP3P2-201ENST00000416030 1696 ntBASIC30.02■■■□□ 2.4
HFM1A2PYH4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
HFM1A2PYH4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.02■■■□□ 2.4
HFM1A2PYH4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC30.02■■■□□ 2.4
HFM1A2PYH4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
HFM1A2PYH4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC30.02■■■□□ 2.4
HFM1A2PYH4 AL390719.1-204ENST00000412397 1219 ntBASIC30.02■■■□□ 2.4
HFM1A2PYH4 KRT17P3-201ENST00000420566 1262 ntBASIC30.02■■■□□ 2.4
HFM1A2PYH4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
HFM1A2PYH4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC30.02■■■□□ 2.4
HFM1A2PYH4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
HFM1A2PYH4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC30.01■■■□□ 2.4
HFM1A2PYH4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
HFM1A2PYH4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
HFM1A2PYH4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC30.01■■■□□ 2.39
HFM1A2PYH4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.01■■■□□ 2.39
HFM1A2PYH4 AL359736.2-201ENST00000621992 437 ntBASIC30.01■■■□□ 2.39
HFM1A2PYH4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
HFM1A2PYH4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC30.01■■■□□ 2.39
HFM1A2PYH4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
HFM1A2PYH4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
HFM1A2PYH4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC30■■■□□ 2.39
HFM1A2PYH4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30■■■□□ 2.39
HFM1A2PYH4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
HFM1A2PYH4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms