Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAV19A0A0A6YYK7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 AC124016.1-201ENST00000609552 612 ntBASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAV19A0A0A6YYK7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 AC133681.1-201ENST00000465482 601 ntBASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 CLDN5-201ENST00000403084 2357 ntBASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV19A0A0A6YYK7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 KRASP1-201ENST00000407852 552 ntBASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 AC079834.2-201ENST00000609776 1949 ntBASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV19A0A0A6YYK7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 PRKY-204ENST00000533551 1019 ntBASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 Z99916.2-201ENST00000604037 246 ntBASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV19A0A0A6YYK7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRAV19A0A0A6YYK7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 AC110285.5-201ENST00000611501 352 ntBASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV19A0A0A6YYK7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms