Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
UBE4BO95155 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
UBE4BO95155 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.85□□□□□ -0.99
UBE4BO95155 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
UBE4BO95155 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
UBE4BO95155 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.84□□□□□ -0.99
UBE4BO95155 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 RN7SKP208-201ENST00000365474 361 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 VN2R17P-201ENST00000391712 832 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 COX6A1P3-201ENST00000404167 293 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AC126124.1-201ENST00000426104 185 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AL353754.1-201ENST00000440219 340 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AC118653.1-201ENST00000442627 561 ntTSL 3 BASIC8.84□□□□□ -0.99
UBE4BO95155 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.84□□□□□ -0.99
UBE4BO95155 YAP1P2-201ENST00000455104 610 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 AF279873.2-201ENST00000468681 744 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 RN7SL792P-201ENST00000496286 305 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AL449212.1-201ENST00000499853 517 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AC109439.1-201ENST00000511236 715 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AC091839.1-201ENST00000513087 269 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 AC084251.1-201ENST00000521867 382 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 PTK2-241ENST00000522950 548 ntTSL 4 BASIC8.84□□□□□ -0.99
UBE4BO95155 SERPINA15P-201ENST00000529287 266 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.84□□□□□ -0.99
UBE4BO95155 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC8.84□□□□□ -0.99
UBE4BO95155 MT1L-202ENST00000566367 78 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC8.84□□□□□ -0.99
UBE4BO95155 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC8.84□□□□□ -0.99
UBE4BO95155 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.84□□□□□ -0.99
UBE4BO95155 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC8.84□□□□□ -0.99
UBE4BO95155 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 AC114786.2-201ENST00000510090 1426 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 AL022334.1-201ENST00000417397 1726 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC8.84□□□□□ -0.99
UBE4BO95155 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC8.84□□□□□ -0.99
UBE4BO95155 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 AC022150.4-201ENST00000598322 2848 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 AP002991.2-201ENST00000623807 2801 ntBASIC8.84□□□□□ -0.99
UBE4BO95155 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
UBE4BO95155 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.83□□□□□ -1
UBE4BO95155 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.83□□□□□ -1
UBE4BO95155 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 TLK2P2-201ENST00000414066 2240 ntBASIC8.83□□□□□ -1
UBE4BO95155 PPIAP2-201ENST00000414143 492 ntBASIC8.83□□□□□ -1
UBE4BO95155 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.83□□□□□ -1
UBE4BO95155 FAF2P1-201ENST00000429974 1298 ntBASIC8.83□□□□□ -1
UBE4BO95155 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 PGGT1BP1-201ENST00000455321 1023 ntBASIC8.83□□□□□ -1
UBE4BO95155 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
UBE4BO95155 AC105910.1-201ENST00000482585 483 ntBASIC8.83□□□□□ -1
UBE4BO95155 RN7SL505P-201ENST00000482644 293 ntBASIC8.83□□□□□ -1
UBE4BO95155 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.83□□□□□ -1
UBE4BO95155 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC8.83□□□□□ -1
UBE4BO95155 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC8.83□□□□□ -1
UBE4BO95155 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 MRPL40P1-201ENST00000542687 604 ntBASIC8.83□□□□□ -1
UBE4BO95155 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC8.83□□□□□ -1
UBE4BO95155 AC009997.1-201ENST00000557862 129 ntBASIC8.83□□□□□ -1
UBE4BO95155 AC024270.1-201ENST00000559181 404 ntBASIC8.83□□□□□ -1
UBE4BO95155 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC8.83□□□□□ -1
UBE4BO95155 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC8.83□□□□□ -1
UBE4BO95155 AC091132.4-201ENST00000587960 2262 ntBASIC8.83□□□□□ -1
UBE4BO95155 AL049776.1-201ENST00000624600 2025 ntBASIC8.83□□□□□ -1
UBE4BO95155 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.83□□□□□ -1
UBE4BO95155 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.83□□□□□ -1
UBE4BO95155 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 DLD-205ENST00000440410 1993 ntTSL 2 BASIC8.83□□□□□ -1
UBE4BO95155 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.83□□□□□ -1
UBE4BO95155 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
UBE4BO95155 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms