Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 IGKV1D-35-201ENST00000442736 271 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 DEFT1P-201ENST00000453425 496 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 RPS20P23-201ENST00000461683 354 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 TUBB3P2-201ENST00000480063 232 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 RN7SL687P-201ENST00000480496 285 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC104164.4-201ENST00000483456 493 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC138356.2-201ENST00000521192 667 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 BMS1P16-201ENST00000556075 1147 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 MPPE1P1-201ENST00000557286 1076 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC137800.1-202ENST00000562098 446 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC105036.1-201ENST00000566222 271 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC093525.3-201ENST00000568040 287 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 OR7E16P-201ENST00000592975 885 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 HMGN2P46-208ENST00000598619 490 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AL034374.2-201ENST00000605281 548 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AL139317.4-201ENST00000605879 760 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 RFPL3S-206ENST00000621921 433 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 ALG13-226ENST00000622986 582 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC024580.1-201ENST00000623020 674 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 HLA-B-257ENST00000640094 147 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC119674.1-217ENST00000641942 1086 ntBASIC7.57□□□□□ -1.2
SNX18Q96RF0 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 CADM2-203ENST00000407528 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 IL15-203ENST00000394159 1545 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNX18Q96RF0 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.57□□□□□ -1.2
SNX18Q96RF0 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC009044.1-201ENST00000624577 1798 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 OLFM5P-201ENST00000411807 1478 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 CAPN3-208ENST00000397204 1237 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AL035467.1-201ENST00000403583 686 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 RN7SKP169-201ENST00000411124 291 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AL355149.1-201ENST00000438396 882 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 RPL4P1-201ENST00000496596 1278 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 MTND6P25-201ENST00000528711 516 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC055716.1-201ENST00000550077 495 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC060766.2-201ENST00000588235 334 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms