Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 GAPDHP44-201ENST00000513513 1007 ntBASIC8.91□□□□□ -0.98
UBE4BO95155 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.91□□□□□ -0.98
UBE4BO95155 AC083906.4-201ENST00000514634 987 ntBASIC8.91□□□□□ -0.98
UBE4BO95155 IGHVIV-44-1-201ENST00000519334 338 ntBASIC8.91□□□□□ -0.98
UBE4BO95155 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 OR4A11P-201ENST00000529557 906 ntBASIC8.91□□□□□ -0.98
UBE4BO95155 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.91□□□□□ -0.98
UBE4BO95155 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC8.91□□□□□ -0.98
UBE4BO95155 GLUD1P2-201ENST00000583339 201 ntBASIC8.91□□□□□ -0.98
UBE4BO95155 GLUD1P8-201ENST00000585063 203 ntBASIC8.91□□□□□ -0.98
UBE4BO95155 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC8.91□□□□□ -0.98
UBE4BO95155 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.91□□□□□ -0.98
UBE4BO95155 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.91□□□□□ -0.98
UBE4BO95155 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
UBE4BO95155 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.91□□□□□ -0.98
UBE4BO95155 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC8.91□□□□□ -0.98
UBE4BO95155 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 SMG1P1-202ENST00000309865 4223 ntBASIC8.91□□□□□ -0.98
UBE4BO95155 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
UBE4BO95155 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
UBE4BO95155 MAPK10-255ENST00000641020 2412 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 OR8B9P-202ENST00000642028 5216 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 AC114324.1-201ENST00000504077 3152 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.9□□□□□ -0.98
UBE4BO95155 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.9□□□□□ -0.98
UBE4BO95155 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.9□□□□□ -0.98
UBE4BO95155 AL122003.1-201ENST00000435206 784 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC8.9□□□□□ -0.98
UBE4BO95155 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC8.9□□□□□ -0.98
UBE4BO95155 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC8.9□□□□□ -0.98
UBE4BO95155 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC8.9□□□□□ -0.98
UBE4BO95155 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC8.9□□□□□ -0.98
UBE4BO95155 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC8.9□□□□□ -0.98
UBE4BO95155 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC8.9□□□□□ -0.98
UBE4BO95155 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC8.9□□□□□ -0.98
UBE4BO95155 AC000068.3-201ENST00000607934 427 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 AC108704.1-201ENST00000611714 744 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 AC104237.3-201ENST00000611809 427 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 AL133279.3-201ENST00000563140 2352 ntBASIC8.9□□□□□ -0.98
UBE4BO95155 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.9□□□□□ -0.98
UBE4BO95155 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.9□□□□□ -0.98
UBE4BO95155 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
UBE4BO95155 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.9□□□□□ -0.99
UBE4BO95155 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC8.9□□□□□ -0.99
UBE4BO95155 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.9□□□□□ -0.99
UBE4BO95155 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
UBE4BO95155 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
UBE4BO95155 XRCC6P3-201ENST00000422187 1621 ntBASIC8.89□□□□□ -0.99
UBE4BO95155 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.89□□□□□ -0.99
UBE4BO95155 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
UBE4BO95155 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
UBE4BO95155 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
UBE4BO95155 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
UBE4BO95155 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
UBE4BO95155 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
UBE4BO95155 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
UBE4BO95155 SNORD3J-201ENST00000408473 190 ntBASIC8.89□□□□□ -0.99
UBE4BO95155 MORN2-202ENST00000409077 465 ntTSL 5 BASIC8.89□□□□□ -0.99
UBE4BO95155 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC8.89□□□□□ -0.99
UBE4BO95155 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC8.89□□□□□ -0.99
UBE4BO95155 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC8.89□□□□□ -0.99
UBE4BO95155 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC8.89□□□□□ -0.99
UBE4BO95155 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC8.89□□□□□ -0.99
UBE4BO95155 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.89□□□□□ -0.99
UBE4BO95155 ELOBP1-201ENST00000447693 357 ntBASIC8.89□□□□□ -0.99
UBE4BO95155 AC009108.1-201ENST00000473913 796 ntBASIC8.89□□□□□ -0.99
UBE4BO95155 RN7SL702P-201ENST00000488394 292 ntBASIC8.89□□□□□ -0.99
UBE4BO95155 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.89□□□□□ -0.99
UBE4BO95155 AC091175.1-201ENST00000522168 572 ntBASIC8.89□□□□□ -0.99
UBE4BO95155 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.89□□□□□ -0.99
UBE4BO95155 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms