Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.55□□□□□ -1.04
SLC1A1P43005 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
SLC1A1P43005 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC009110.1-201ENST00000415422 558 ntTSL 4 BASIC8.55□□□□□ -1.04
SLC1A1P43005 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC8.55□□□□□ -1.04
SLC1A1P43005 RPS10P2-201ENST00000430953 494 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC004801.2-201ENST00000468202 779 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 AC093270.1-201ENST00000482584 486 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.55□□□□□ -1.04
SLC1A1P43005 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC009779.4-201ENST00000554248 611 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SLC1A1P43005 Z95115.1-202ENST00000565764 981 ntTSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC010650.1-201ENST00000567559 494 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC8.55□□□□□ -1.04
SLC1A1P43005 RPL7L1P5-201ENST00000590816 738 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 7SK.12-201ENST00000612820 244 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC004009.3-201ENST00000624160 645 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.55□□□□□ -1.04
SLC1A1P43005 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
SLC1A1P43005 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SLC1A1P43005 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 NF1P2-201ENST00000556855 2505 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 HSPD1P10-201ENST00000404829 1676 ntBASIC8.55□□□□□ -1.04
SLC1A1P43005 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SLC1A1P43005 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SLC1A1P43005 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC8.54□□□□□ -1.04
SLC1A1P43005 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 RNA5SP250-201ENST00000362534 119 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 FAM218BP-201ENST00000408897 458 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.54□□□□□ -1.04
SLC1A1P43005 RPL12P4-201ENST00000432629 497 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 CFL1P8-201ENST00000436148 475 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 RPS29P16-201ENST00000452798 171 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 YAP1P2-201ENST00000455104 610 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SLC1A1P43005 RPL12P32-201ENST00000484010 494 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 AC009269.1-202ENST00000484381 469 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 KRT18P54-201ENST00000513396 748 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.54□□□□□ -1.04
SLC1A1P43005 MTND6P25-201ENST00000528711 516 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 AC006065.2-201ENST00000536978 211 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AC007728.2-202ENST00000567728 1150 ntTSL 3 BASIC8.54□□□□□ -1.04
SLC1A1P43005 RN7SL353P-201ENST00000579902 252 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 RN7SL847P-201ENST00000582819 270 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 AC011444.4-201ENST00000586415 418 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AC026367.2-201ENST00000610630 553 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 AC027139.2-201ENST00000615639 448 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SLC1A1P43005 AC239859.6-201ENST00000622095 213 ntBASIC8.54□□□□□ -1.04
SLC1A1P43005 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms