Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 SLC7A5P1-201ENST00000568957 537 ntBASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 UBE2DNL-204ENST00000602536 740 ntBASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDD3Q9Y3P4 AC019069.1-201ENST00000610008 1333 ntBASIC17.71■□□□□ 0.42
RHBDD3Q9Y3P4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.71■□□□□ 0.42
RHBDD3Q9Y3P4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RHBDD3Q9Y3P4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 AC026271.2-201ENST00000428091 497 ntBASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.69■□□□□ 0.42
RHBDD3Q9Y3P4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 RARRES2P6-201ENST00000567333 442 ntBASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 RBM17P2-201ENST00000616397 1405 ntBASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RHBDD3Q9Y3P4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 AC116050.2-201ENST00000612102 1779 ntBASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms