Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF11Q9Y3C5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 AC112907.3-201ENST00000577781 2400 ntBASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 AC026271.2-201ENST00000428091 497 ntBASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF11Q9Y3C5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 KRT18P5-201ENST00000436075 1291 ntBASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF11Q9Y3C5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 TERF1P5-201ENST00000477545 1207 ntBASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 AC010536.3-201ENST00000620306 533 ntBASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RNF11Q9Y3C5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CDV3P1-201ENST00000471403 739 ntBASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 AC099778.1-201ENST00000568593 1911 ntBASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF11Q9Y3C5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms